Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme102037g00001 AGGAAAGGTGTACAAGGTGCTGAACCTGGTCCAGTTTTAAGCTGGAACCAGAGAGCAAAAATTGCATTTGGTGCAGCAAAAGGGCTAGAGTTTCTTCATGAAAAGGTTCAACCTTCTATTGTTCATCGCGATGTTCGATCCAGCAATGTCTTGCTGTTTAATGACTATGAGGCCAAGATTGCTGATTTTAGCTTGACAAATCAGTCTTCTGACACCGCAGCTCGTCTACATTCGACAAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATACCTTTTAA 285 0.4281 RKGVQGAEPGPVLSWNQRAKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYTF 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme102037g00001 94 ProSiteProfiles Protein kinase domain profile. 1 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme102037g00001 94 Pfam Protein kinase domain 15 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme102037g00001 94 Gene3D Transferase(Phosphotransferase) domain 1 5 94 - -
Trme102037g00001 94 ProSitePatterns Tyrosine protein kinases specific active-site signature. 40 52 IPR008266 GO:0004672|GO:0006468
Trme102037g00001 94 SUPERFAMILY Protein kinase-like (PK-like) 10 93 IPR011009 -
Trme102037g00001 94 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme102037g00001 Trme-Chr102037 54 338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme102037g00001 11 92 Trihelix Transcription Factor Family AT1G70460 53.659 6.08e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Trme102037g00001 Pkinase 8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme102037g00001 - - gmx:100786291 187.963