Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1019826g00001 TTGTTTAGGTATGAGCTCGGTCGCCAGCCAGCTAACACCAAGCTATCAAGCAACAAAACTGTGAGGAGGATTCGTGTTAGAGGTGGAAATGTTAAGTGGAGAGCCTTGAGATTGGATACTGGAAACTTTTCTTGGGGAAGTGAAGCTGTCACCCGCAAAACCCGTTTGCTCGATGTTGTGTACAATGCTTCCAACAATGAGCTTGTCCGTACTCAGACCCT 221 0.4706 MFRYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTL 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1019826g00001 74 NCBIfam ribosomal protein eS8 3 74 IPR001047 GO:0003735|GO:0005840|GO:0006412
Trme1019826g00001 74 PANTHER 40S RIBOSOMAL PROTEIN S8 3 74 IPR001047 GO:0003735|GO:0005840|GO:0006412
Trme1019826g00001 74 CDD Ribosomal_S8e_like 3 74 - -
Trme1019826g00001 74 Gene3D - 9 74 - -
Trme1019826g00001 74 Pfam Ribosomal protein S8e 4 74 IPR022309 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1019826g00001 3 74 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 95.833 5.91e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1019826g00001 K02995 - aew:130795670 147.517