Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme101835g00001 TTAACAGACTTCGGTCTTTCAAAAGTTGGTCTCATCAACAGCACGGATGATTTGTCTGGTCCAGCAGTCAGTGGTACATCCCTACTTGGGGAGGATGAATCTCATACATTTACATCTGAGGATCAAAGGGAACGGAGGAAGAAACGTTCTGCTGTTGGCACACCTGATTACTTAGCTCCTGAGATACTTTTAGGAACTGGACATG 205 0.4488 LTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDESHTFTSEDQRERRKKRSAVGTPDYLAPEILLGTGH 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme101835g00001 68 SUPERFAMILY Protein kinase-like (PK-like) 1 67 IPR011009 -
Trme101835g00001 68 MobiDBLite consensus disorder prediction 34 52 - -
Trme101835g00001 68 MobiDBLite consensus disorder prediction 15 68 - -
Trme101835g00001 68 Gene3D Transferase(Phosphotransferase) domain 1 1 68 - -
Trme101835g00001 68 ProSiteProfiles Protein kinase domain profile. 1 68 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme101835g00001 Trme-Chr101835 367 571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme101835g00001 1 68 AGC Kinase Gene Family AT3G17850 86.765 2.18e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme101835g00001 - - tpra:123913507 136.732