Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme101738g00001 AAAGATATCAAGAAATTGGATTTGAAATCCCTAAGGAAGCATATTGGTCTAGTACAACAAGAACCAGCACTATTTGCAACATCAATTTATAAAAACATTCTTTATGGCAAAGAAGAAGCATCAGAATCAGAAGTGATTGAAGCAGCTAAACTAGCCAATGCTCATAACTTCATAAGTGCACTTCCTGAAGGCTACTCAACCAAAGCAGGTGAAAGAGGAGTTCAACTATCTGGTGGCCAAAAACAAAGGGTAGCCATTGCAAGGGCTGTTTTGAGAAACCCTAAAATATTACTTCTGGATGAAGCCACAAGTGCACTCGATGTAGAGTCGGAGCGCGTTGTACAACAAGCTTTAGACAAGTTGATG 366 0.3962 KDIKKLDLKSLRKHIGLVQQEPALFATSIYKNILYGKEEASESEVIEAAKLANAHNFISALPEGYSTKAGERGVQLSGGQKQRVAIARAVLRNPKILLLDEATSALDVESERVVQQALDKLM 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme101738g00001 122 Gene3D - 1 122 IPR027417 -
Trme101738g00001 122 PANTHER ABC TRANSPORTER B FAMILY 2 122 IPR039421 -
Trme101738g00001 122 Pfam ABC transporter 1 104 IPR003439 GO:0005524
Trme101738g00001 122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 122 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme101738g00001 Trme-Chr101738 320 685 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme101738g00001 1 122 Calmodulin-binding Proteins AT2G36910 66.393 3.75e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme101738g00001 K05658 - gmx:100809752 214.157