Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1017337g00001 GAGGAAAATTCTGGTTCGCTTGATACTGGTTTTGGGAACATTATAGTAGTGGACAATCTTCCCGTTGTTCCTAAGGAAAAGTTTGAGAAGCTTGAAGGCGTTGTTCGGAAAATTTACGGTCAGCTTGGTGTTATCAAGGATGATGGTCTTTGGATGCCCGTTGATCCTGCCACTGGAAAGTCCTTAG 187 0.4385 EENSGSLDTGFGNIIVVDNLPVVPKEKFEKLEGVVRKIYGQLGVIKDDGLWMPVDPATGKSL 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1017337g00001 62 Gene3D - 12 62 IPR012677 -
Trme1017337g00001 62 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 6 61 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1017337g00001 Trme-Chr1017337 36 222 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1017337g00001 1 62 Eukaryotic Initiation Factors Gene Family AT5G27640 74.194 5.22e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1017337g00001 K03253 - aew:130792808 108.227