Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme101716g00001 ATGTTGATTGTGAAGCCTAGACCAGTGCAGGCAGCTAGCATTCCTGGCATGCTCGGGATGTTCCAAAATGAATGGGATGGGTTGATGCTATCTAATTTTGCATTGGAGCAGCAATTGCATACAGCAAGGCAAGAGTTAAGTCATGCTCTATATCAG 156 0.4487 MLIVKPRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQ 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme101716g00001 52 PANTHER PRE-MRNA-PROCESSING FACTOR 19 3 52 IPR038959 GO:0000398|GO:0000974|GO:0006281|GO:0061630
Trme101716g00001 52 Pfam Prp19/Pso4-like 11 52 IPR013915 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme101716g00001 3 52 U-box Gene Family AT2G33340 84.000 8.44e-27 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme101716g00001 K10599 - gmx:100527039 104.375