Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme101710g00001 ATGTGTAATGCCTATTGTATTGTGCTTCCCATATTACAGAGACCACAGGCCTTCAATGTGGCAGTAGGAGTAGGTGTAGGGCACGGACTTATACTTGAGATAGTCATGACATTTGGGTTAATGTATGTTGTATATGCCACTGCCATTGATCCCAAAAGGGGTTCTATAGGCACAATTGCTCCCTTAGCAATTGCATTTGTTGTTGGTGCAAACATCTTAGCTGGTGGGCCTTTTGATGGAGCATGCATGAATCCTGCTCGGGCTTTTGGGCCTGCTTTAGTGGGCTGGAGATGGCATTATCATTGGATCTTTTGGGTTGGTCCATTACTTGGAGCTGCAATTGCAGCACTTTTATATGAATATATTATGGTTCCAACTGATCCTCCTCATACTCATACTCATCCTCATCATCAACCTTTGGCTCCTGAAGATTATTAG 438 0.4338 MCNAYCIVLPILQRPQAFNVAVGVGVGHGLILEIVMTFGLMYVVYATAIDPKRGSIGTIAPLAIAFVVGANILAGGPFDGACMNPARAFGPALVGWRWHYHWIFWVGPLLGAAIAALLYEYIMVPTDPPHTHTHPHHQPLAPEDY 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme101710g00001 145 PRINTS Major intrinsic protein family signature 32 50 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme101710g00001 145 PRINTS Major intrinsic protein family signature 65 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme101710g00001 145 PRINTS Major intrinsic protein family signature 102 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme101710g00001 145 SUPERFAMILY Aquaporin-like 12 131 IPR023271 -
Trme101710g00001 145 PANTHER AQUAPORIN-8 14 131 IPR034294 -
Trme101710g00001 145 Gene3D Glycerol uptake facilitator protein. 4 129 IPR023271 -
Trme101710g00001 145 Pfam Major intrinsic protein 17 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme101710g00001 Trme-Chr101710 88 525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme101710g00001 6 145 Major Intrinsic Protein MIP AT1G73190 67.133 1.16e-67 204