Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme101537g00001 ATGGTTCTCCTCTTAGGAGCCTGTCCTGAATACGGATGCCTAGTGTATGAGTACATGTCAAATGGAAGCTTAGACGATTGCCTATTTAGTCGAGGAAACAGTCCTCCACTTTCTTGGCAGTTAAGATTCAAAATTGCAGCCGAAATCGGCACTGGCTTGTTGTTCCTTCACCAAGCAAAACCAGAACCTATAGTACACAGAGACTTAAAACCAGGAAACATCTTACTAGACAGAAACTACGTAGCCAAAATCAGTGATGTAGGTTTGGCAAGACTAGTTCCACCGTCTGTAGCCGACTGTGTGACACAATACCGATTGACAGAAACAGCAGGAACTTTCTGTTATATCGATCCCGAGTATCAACAAACAGGAATGTTAGGTGTGAAATCAGATATATATTCTCTTGGAATCATTTACCTTCAAATTTTGACAGCAAAACCACCAACAGGTTTGGCACATAATGCTCAACAAGCCATTGAGAAAGGAACTTTTCCTGAGATGCTGGATCCTTTAGTGACTGATTGGCCAATGGAGGATGTTATGAGTTTAGCAAAGATTGCGGTTCAGTGTGCCGAGTTAAGGCGGAAAGATAGACCTGATCTTG 604 0.4238 MVLLLGACPEYGCLVYEYMSNGSLDDCLFSRGNSPPLSWQLRFKIAAEIGTGLLFLHQAKPEPIVHRDLKPGNILLDRNYVAKISDVGLARLVPPSVADCVTQYRLTETAGTFCYIDPEYQQTGMLGVKSDIYSLGIIYLQILTAKPPTGLAHNAQQAIEKGTFPEMLDPLVTDWPMEDVMSLAKIAVQCAELRRKDRPDL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme101537g00001 201 ProSitePatterns Serine/Threonine protein kinases active-site signature. 64 76 IPR008271 GO:0004672|GO:0006468
Trme101537g00001 201 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme101537g00001 201 SUPERFAMILY Protein kinase-like (PK-like) 4 200 IPR011009 -
Trme101537g00001 201 Gene3D Transferase(Phosphotransferase) domain 1 1 201 - -
Trme101537g00001 201 SMART serkin_6 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme101537g00001 201 FunFam Os07g0541700 protein 19 107 - -
Trme101537g00001 201 PANTHER OS02G0152300 PROTEIN 1 201 - -
Trme101537g00001 201 Pfam Protein kinase domain 11 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme101537g00001 Trme-Chr101537 83 686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme101537g00001 1 201 Receptor kinase-like Gene Family AT5G35380 80.100 9.17e-116 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Trme101537g00001 Pkinase 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme101537g00001 - - gmx:100803867 361.303