Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme101523g00001 ATCATGGTTGGTCTACCATCTGTTGAGAATAGGGAAATGATCCTTAAAACTCTTCTGTCAAAGGAAAAGCACGAAAACTTAGACTTCAAAGAATTAGCAACCATGACNGAAGGATTTAGTGGAAGTGATCTTAAGAATTTGTGCATCACTGCAGCGTATCGACCTGTTAGGGAGTTAATACAGCAGGAGCGAAATAAGGAAATGGAAAAGAAGAAAAAAGAGGCCGAAAGTGTCAGCTCAGATGATGCTTCAAATAATAATGATAACGAAGAACGAGAAATTACCTTGAGGTCTTTAAACATGGAAGACATGAAACAAGCTAAGAATCAGGTATGA 336 0.378 IMVGLPSVENREMILKTLLSKEKHENLDFKELATMTEGFSGSDLKNLCITAAYRPVRELIQQERNKEMEKKKKEAESVSSDDASNNNDNEEREITLRSLNMEDMKQAKNQV 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme101523g00001 111 MobiDBLite consensus disorder prediction 60 99 - -
Trme101523g00001 111 Gene3D - 4 110 - -
Trme101523g00001 111 Pfam AAA+ lid domain 26 69 IPR041569 -
Trme101523g00001 111 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 111 - -
Trme101523g00001 111 MobiDBLite consensus disorder prediction 60 111 - -
Trme101523g00001 111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 67 IPR027417 -
Trme101523g00001 111 Coils Coil 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme101523g00001 Trme-Chr101523 109 621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme101523g00001 1 62 Calmodulin-binding Proteins AT3G56690 37.500 1.09e-07 47.0