Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1013g00001 ACTTTTACGAAAATATCAAATGAAAATCAAGAGAAAGCTGGCCAAATTTCTCAGCTACCAGATGTGAATAGTGGTGACAATAACCCCCTTGATCACTCTGCCGCAAGGCCATTGCATGTGGAAGTCTGTCCTAAAGGCATGGTTATCGAATATCTCTTTTATGGTAAAGTTGAAGAGGGAAGCGATGACCCTGGAGCTGCCCTTGGAAACAAGATCACTATAATGTGCTCTTGTAAGCTAAAAGATGGGACAGTATATGAGGAATTTGTGGAAGCACCCTATGGTTTTATCCTTGGTAAAGACGGAGTCAAGGGATGGGAGGTTGGCATCAAAGGGATGAGGGTCGGTGACAAACGCCGACTTACCATTCCACCATCTATGGGATACGGAGAAGGTGGTAACCCCAACAAGAAAGTGCCACCTGACTCATGGCTAATTCATGATATTGAGTTGATTGCGTATTCTGGGATGAGTGAGGCTGATGAAAATGTTAAATAG 498 0.4378 TFTKISNENQEKAGQISQLPDVNSGDNNPLDHSAARPLHVEVCPKGMVIEYLFYGKVEEGSDDPGAALGNKITIMCSCKLKDGTVYEEFVEAPYGFILGKDGVKGWEVGIKGMRVGDKRRLTIPPSMGYGEGGNPNKKVPPDSWLIHDIELIAYSGMSEADENVK 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1013g00001 165 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 69 155 IPR001179 GO:0003755
Trme1013g00001 165 MobiDBLite consensus disorder prediction 1 33 - -
Trme1013g00001 165 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 3 154 - -
Trme1013g00001 165 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 67 152 IPR001179 GO:0003755
Trme1013g00001 165 SUPERFAMILY FKBP-like 44 154 - -
Trme1013g00001 165 Gene3D - 20 158 IPR046357 GO:0003755
Trme1013g00001 165 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1013g00001 Trme-Chr1013 914 3079 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1013g00001 69 159 Calmodulin-binding Proteins AT5G48570 37.234 7.38e-14 66.2