Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme101351g00001 ATGGCAATGGCAGATAATAGACAGAGGAATATGCCTCTTCCTGATGACAGAGTACCACCAAGAGGCCAAGCACTTGCCTATCCAGAAGCAGTTCTACTTGTCAATCCTATAGAACCAGAA 120 0.45 MAMADNRQRNMPLPDDRVPPRGQALAYPEAVLLVNPIEPE 40
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme101351g00001 40 MobiDBLite consensus disorder prediction 1 21 - -
Trme101351g00001 40 Pfam Rhamnogalacturonate lyase family 1 39 IPR010325 -
Trme101351g00001 40 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme101351g00001 Trme-Chr101351 1 120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme101351g00001 1 40 Polysaccharide Lyase AT1G09880 77.500 1.01e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme101351g00001 K18195 - mnt:21408253 82.4185