Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10133g00001 AGAAGCACTAGGGAAACAACACCGGTCCATTTGATAAGGGTCTCAGACATTGTCAGTACTCCTAGTTCAACTACTAAGCGAACTTTTTCAATTGGAGCTCATCGCAGTCCGGAGCAAGCAAGTAGACCTGTGATCCAGTCTACAAAGGAATTTGATGAATTCTTTGCTAAACATGAAGCTGCTCAGCAAAAGGCGTTCATGGAAAAGTACAACTTTGATCCTGTGACAGAGATGCCACTCCCTGGGCGTTACGAATGGGAAAAATTGACACCTTAG 276 0.442 RSTRETTPVHLIRVSDIVSTPSSTTKRTFSIGAHRSPEQASRPVIQSTKEFDEFFAKHEAAQQKAFMEKYNFDPVTEMPLPGRYEWEKLTP 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10133g00001 91 Gene3D p27 34 91 IPR044898 -
Trme10133g00001 91 Pfam Cyclin-dependent kinase inhibitor 47 89 IPR003175 GO:0004861|GO:0005634|GO:0051726
Trme10133g00001 91 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 90 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trme10133g00001 91 PIRSF CKI_KRP_plant 1 91 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10133g00001 Trme-Chr10133 990 1358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10133g00001 1 89 Core Cell Cycle Gene Families AT2G32710 48.421 1.66e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10133g00001 - - mtr:11425069 120.938