Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme101322g00001 ATGAATGTACGCAAGGGTTCAACAGTTTGGGTTCCAGATAAGGAATTAGCTTGGATACCTGCTGAAGTAATCGATTCTGATGATAAATTTGTTCAGATTGTAACTGATTCTGGCAAGACGGTTTTTGTTTCGGCGGAGAAATTGTGTCCGAGAGATGCGGATGAAGATGAGCTTGGTGGATTTGAAGATATGACGAGATTGACTTACTTGAATGAACCAGGAGTGTTGTATAATATTCGAAGGAGATATGCGCTTAATGATATTTAT 267 0.3895 MNVRKGSTVWVPDKELAWIPAEVIDSDDKFVQIVTDSGKTVFVSAEKLCPRDADEDELGGFEDMTRLTYLNEPGVLYNIRRRYALNDIY 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme101322g00001 89 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Trme101322g00001 89 Pfam Myosin N-terminal SH3-like domain 6 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Trme101322g00001 89 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 89 IPR027417 -
Trme101322g00001 89 ProSiteProfiles Myosin motor domain profile. 59 89 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme101322g00001 89 Gene3D Kinesin motor domain 8 89 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme101322g00001 Trme-Chr101322 254 587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme101322g00001 1 89 Myosins gene family AT4G33200 61.798 6.07e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme101322g00001 K10357 - vvo:131613331 135.576