Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme101317g00001 TTTTTTGCTTTTCAAACAATGCAGCCTGACATCACAGGACCTGGAGTGAATATTTTAGCAGCATGGTCTCCAGTGGCTACTGAAGACACAGTTGAACAAAAATCTGTCAACTATAACATCATTTCAGGAACATCAATGTCTTGTCCGCACATATCCGCAGTTGCAGCAATTATCAAATCTTACAACCCATCCTGGACTCCTGCAGCTATAATGTCAGCAATAATGACAACAGCAACAGTACTGGATAACACAAACCATCTCATAGGAAGAGATCCAAATGGAACTCAAACAACTCCATTCGACTACGGATCCGGACACATTAATCCACTTGCATCACTCAATCCCGGACTAGTATACGATTTTAGTTCACAAGATGCACTCAATTTTCTCTGCAGCAATGGTGCAAGTCCATCACAGCTTAAAAACATCACTGGTGAACTCACTCAATGTCAGAAATATCCTACACCTTCCTACAACTTCAATTACCCTTCAATTGGTGTATCCAACTTGAATGGAAGTTTATCTGTTTATCGAACCGTTACATACTATGGTCAGGAACCAGC 563 0.4085 FFAFQTMQPDITGPGVNILAAWSPVATEDTVEQKSVNYNIISGTSMSCPHISAVAAIIKSYNPSWTPAAIMSAIMTTATVLDNTNHLIGRDPNGTQTTPFDYGSGHINPLASLNPGLVYDFSSQDALNFLCSNGASPSQLKNITGELTQCQKYPTPSYNFNYPSIGVSNLNGSLSVYRTVTYYGQEPA 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme101317g00001 188 Pfam Subtilase family 6 86 IPR000209 GO:0006508|GO:0008236
Trme101317g00001 188 Gene3D - 130 188 - -
Trme101317g00001 188 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 182 IPR045051 -
Trme101317g00001 188 ProSitePatterns Serine proteases, subtilase family, serine active site. 43 53 IPR023828 -
Trme101317g00001 188 Gene3D Peptidase S8/S53 domain 5 125 IPR036852 GO:0004252|GO:0006508
Trme101317g00001 188 ProSiteProfiles Serine proteases, subtilase domain profile. 1 113 - -
Trme101317g00001 188 SUPERFAMILY Subtilisin-like 7 117 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme101317g00001 Trme-Chr101317 1 687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme101317g00001 5 188 Subtilisin-like Serine Gene Family AT4G34980 43.523 5.20e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme101317g00001 - - pvu:PHAVU_011G092600g 317.39