Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme101315g00001 GCTGTCCAAGTTATCTTAATGGGAGCTGTTGAGGGTTACCGTATTGCTGGCGGACCTCTTGGAGAAGTTGTCGACCCACTCTACCCCGGAGGGAGCTTCGACCCATTAGGCCTCGCTGAAGACCCCGAGGCTTTTGCAGAGTTAAAGGTTAAAGAACTCAAGAATGGTAGGTTAGCTATGTTCTCTATGTTTGGATTCTTCGTTCAAGCTATTGTAACCGGAAAAGGACCTATAGAGAATCTTGCTGACCACCTTGCTGACCCTGTTAACAACAATGCTTGGGCCTTCGCCACAAACTTTGCCCCAGGAAAGTGA 315 0.4857 AVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFAPGK 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme101315g00001 104 Pfam Chlorophyll A-B binding protein 2 70 IPR022796 -
Trme101315g00001 104 Gene3D Chlorophyll a/b binding protein domain 1 97 - -
Trme101315g00001 104 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 104 IPR001344 GO:0009765|GO:0016020
Trme101315g00001 104 SUPERFAMILY Chlorophyll a-b binding protein 2 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme101315g00001 Trme-Chr101315 2 316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme101315g00001 1 104 Chloroplast and Mitochondria Gene Families AT1G29930 92.381 7.51e-64 192