Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme101153g00001 ATGGCATTATGGCAGGTTATGGTGGGGCTTATGATAGAGTCAGCACAGCCATTACTATTAAAATGGGAGCAACTTATTGAGGACCAAGGAGGGGTCACAGCTGAAGTTAAAGTTGATGCTGATTTGAGGGGCTTTTCAGCTGATGTTATTTCAAGAGTTTGTTTTGGACATTCTTATTCTAAGGGAAAAGAAGTTTTCTTAAAGCTTAGAAGCATCCAAAAGATCATGTCCAACCATGGCTTCCTTTTTGACAAGAGTGGTTTCCTAGACAAACTGAAATTTCGGACAAAGAAGCAAAATGAGATAAGCAATTTAGAGAAAGAGATAGAGTCACTGATATGGGAGTTAGTGGAGGAACGTAAGCGAGAATCTTCGTCAGAAAAGGATTTGATGCAGTTACTTCTGGAAGCAGCAATGAGTGATCAAAGTTTGGGGAAGGACTTTTCCAAGCAATTCATCGTGGATAACTGCAAAAACATATACTTCGCTGGTCATGAAACTACTGCTGTTGCAGCTTCTTGGTGTTTGATGCTTCT 536 0.4011 MALWQVMVGLMIESAQPLLLKWEQLIEDQGGVTAEVKVDADLRGFSADVISRVCFGHSYSKGKEVFLKLRSIQKIMSNHGFLFDKSGFLDKLKFRTKKQNEISNLEKEIESLIWELVEERKRESSSEKDLMQLLLEAAMSDQSLGKDFSKQFIVDNCKNIYFAGHETTAVAASWCLMLL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme101153g00001 179 Pfam Cytochrome P450 8 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme101153g00001 179 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 179 - -
Trme101153g00001 179 Coils Coil 95 122 - -
Trme101153g00001 179 Gene3D Cytochrome P450 2 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme101153g00001 179 SUPERFAMILY Cytochrome P450 5 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme101153g00001 Trme-Chr101153 23 687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme101153g00001 7 179 Cytochrome P450 AT5G24910 55.801 3.10e-59 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme101153g00001 K20661 - gmx:100815776 278.1