Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10099g00001 ATGGATGAAGTTGTGATACTACAAGCCAATGCTAAACAAGCTGAGCCAATGGTTAACATTAGAAAGGAGTCACCATTAACAACTTCAAGTCCAGTGGATATATGCTTTTCTGGTGGATTGCTTGGTCCTGATGGAACTCAAAGATACTTGGGTAAATGGTGCAAGCGTGGACAAAATGGTGAATCAACATCCACAAAAGGGAATTTGATATCTGTAGGAGCTGATGGTAGAGGTGGCAAAGTCAAAGTTCTAAGGTCTCCTAGCCAAGCCTTCTCG 276 0.4239 MDEVVILQANAKQAEPMVNIRKESPLTTSSPVDICFSGGLLGPDGTQRYLGKWCKRGQNGESTSTKGNLISVGADGRGGKVKVLRSPSQAFS 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10099g00001 92 PANTHER RING ZINC FINGER PROTEIN-RELATED 3 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10099g00001 Trme-Chr10099 939 1667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10099g00001 19 89 C3H Transcription Factor Family AT4G01270 43.590 4.37e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10099g00001 K11985 - gmx:100812811 130.954