Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme100941g00001 GCTCATGTGAGAGGTCACCAGGTTAGGAAAAACTATGGGAAGATGAAGATAATTTGGTCGGTTGGGATCGTGGAAAAGGTTATATTACGTTGGCGTCGAAAAGGTAGTGGTTTGCGTGGGTTTAAATCGGAGGCTGTGGCAGAAGGTGTATCATCTTCCACTGAGGATGACTATGATTTTTTGAAAGAAGGCAGGAAGCAAACTGAGAAAAGGTTGGAGAAAGCCCTTGCTAGGGTGAAATCAATGGCACAATATCCAGATGCAAGAGACCAATATCACAGGCTATTGAATGTTGTAACTGAGATACAAGAAAATCAG 318 0.4277 AHVRGHQVRKNYGKMKIIWSVGIVEKVILRWRRKGSGLRGFKSEAVAEGVSSSTEDDYDFLKEGRKQTEKRLEKALARVKSMAQYPDARDQYHRLLNVVTEIQENQ 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme100941g00001 106 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 104 - -
Trme100941g00001 106 Coils Coil 58 78 - -
Trme100941g00001 106 ProSiteProfiles IQ motif profile. 1 16 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme100941g00001 Trme-Chr100941 56 373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme100941g00001 1 106 CAMTA Transcription Factor Family AT2G22300 72.222 3.31e-46 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme100941g00001 K21596 - gmx:100798875 173.711