Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme100817g00001 GCTAAGAGGTTAATTGGTAGAAAGTTTAGTGATCCAGTTGTTCAAAAGGATATCATGTTGTGGCCATTCAAAGTTATTTCCGGTGTTAATGACAAACCTATGATTACTATAAAGTACAAGGGACAGGAGAAGCATCTATGTGCCGAGGAAATCTCATCTATCGTCCTCACAAATATGAAGGAGATTGCAGAGGCATATTTAGAATCACCGGTTAAAAATGCAGTTGTCACTGTGCCTGCTTATTTCAACGATTGTCAGCGAAAAGCTACCATGGATGCTGGTGCCATTGCTGGCCTTAATGTTATGAGGATAATAAACGAACCCACTGCTGCAGCTATTGCATATGGCCTTGACAAGAGAGGTAACTGTGATGGTGAACGAAATATTTTTGTCTTTGATCTTGGTGGTGGGACTTTTGATGTGTCTCTCCTCACAATTAAAGG 443 0.4063 AKRLIGRKFSDPVVQKDIMLWPFKVISGVNDKPMITIKYKGQEKHLCAEEISSIVLTNMKEIAEAYLESPVKNAVVTVPAYFNDCQRKATMDAGAIAGLNVMRIINEPTAAAIAYGLDKRGNCDGERNIFVFDLGGGTFDVSLLTIKG 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme100817g00001 148 ProSitePatterns Heat shock hsp70 proteins family signature 2. 131 144 IPR018181 -
Trme100817g00001 148 FunFam heat shock 70 kDa protein-like 1 54 - -
Trme100817g00001 148 Gene3D - 1 54 - -
Trme100817g00001 148 FunFam Endoplasmic reticulum chaperone BiP 26 131 - -
Trme100817g00001 148 Gene3D - 55 119 - -
Trme100817g00001 148 SUPERFAMILY Actin-like ATPase domain 1 119 IPR043129 -
Trme100817g00001 148 PRINTS 70kDa heat shock protein signature 137 147 - -
Trme100817g00001 148 PRINTS 70kDa heat shock protein signature 74 94 - -
Trme100817g00001 148 PANTHER HEAT SHOCK PROTEIN 70KDA 1 146 IPR013126 GO:0005524|GO:0140662
Trme100817g00001 148 Gene3D - 120 147 - -
Trme100817g00001 148 Pfam Hsp70 protein 1 147 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme100817g00001 Trme-Chr100817 246 688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme100817g00001 1 147 Calmodulin-binding Proteins AT1G16030 73.469 3.54e-73 229