Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme100770g00001 ATGGGAGCACCGAAGAAAAGCTCTGCTAGGGTTTCAGAGGATGACGATGAACTCGTTCGTGTTCCGTTGCAAGCAGTTCTCTTAGCTGATAGTTTCACAACAAAGTTCAGACCTATGACTCTTGAACGCCCCAAAGTGCTATTGCCATTTGTGAATGCTCCGATGATAAATTACACATTGACATGGCTAGAGTCAGCTGGTGTAGAAGAGGTTTTTGTTTTCTGTTGTGCTCGTTCGAAGCAGGTGATTAACTATTTGGAGAAATCTGAGTGGTTTAATCAACCTAATTTTACTGTAACAACTATTCAGTCACAAAATTCTGTCAGTGCTGGTGATGCTCTGCGTGTTATTTACGAGCGCAATGTGATACGAGGAGACTTTGTCCTTGTCAGCGGAGATACTGTGAGCAACATGTCGCTTACTCAGGCGATTTTAGAACATAAAGAAAGGAAGAAGAAAGATAGCAATGCTGTAATGACCATG 483 0.4224 MGAPKKSSARVSEDDDELVRVPLQAVLLADSFTTKFRPMTLERPKVLLPFVNAPMINYTLTWLESAGVEEVFVFCCARSKQVINYLEKSEWFNQPNFTVTTIQSQNSVSAGDALRVIYERNVIRGDFVLVSGDTVSNMSLTQAILEHKERKKKDSNAVMTM 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme100770g00001 161 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 9 161 - -
Trme100770g00001 161 SUPERFAMILY Nucleotide-diphospho-sugar transferases 20 156 IPR029044 -
Trme100770g00001 161 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 161 IPR029044 -
Trme100770g00001 161 Pfam Nucleotidyl transferase 25 156 IPR005835 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme100770g00001 Trme-Chr100770 46 528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme100770g00001 1 161 Eukaryotic Initiation Factors Gene Family AT2G34970 68.862 2.14e-74 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme100770g00001 K03240 - psat:127132412 298.901