Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme100758g00001 CCCAATTCAATTCCACCTTATGAAGTTGCTAATAAGCTGAGAATAGCTGCAGCTTCATTCGGTGTTGTTCGGTATATGGTGGCTTATGCGAATAGCCACACGTTTAACTATGTCCCTCATGTTGTTCGGGAGATGAGGAAAGAGCGGAAAATGTTGTTTGGTTTGGAGGATAAGGGTGTGATCAAGCGTAATGAGCCTCATATTTGTTGTGTTTGTGGGAGAAAATTTTATACTAATGAAAAGCTTGTTAATCATTTCAAGCAACTGCATCAGCGTGAGAATGCGAAAAGAGTNAATCAGATAGAGTCGGCTAGAGGGAGTAGGAAGGTGAAATTGGTGGGTAAGTATTCTATGAAAATGGAAAAGTATAAAAAGGCTGCGAGTGCTGTTTTGACTCCCAAAGTTGGGTATGGTTTGGCAGATGAGCTGAAACGGGCAGGGTTTTGGGTTCAAACTGTGTTGGATAAGCCGCAAGCTGCGGATATTGCGTTGCAAAAGCATATGGTGGATATGATGGATCATAGGNNGGTTGAGTGTGTGGTTCTTGTATCCGATGATTCTGATTTTGTTGATGTAATAAAGGAGGCAAAATTACGGTGTCTCAAGACTGTTGTTATTGGGGATATTAGTAGTGACGGAGTCTTGAAAAGGACTGCTGATACTGCCTTTTCTTGGGAGGAAATTTTGA 688 0.4157 PNSIPPYEVANKLRIAAASFGVVRYMVAYANSHTFNYVPHVVREMRKERKMLFGLEDKGVIKRNEPHICCVCGRKFYTNEKLVNHFKQLHQRENAKRVNQIESARGSRKVKLVGKYSMKMEKYKKAASAVLTPKVGYGLADELKRAGFWVQTVLDKPQAADIALQKHMVDMMDHRXVECVVLVSDDSDFVDVIKEAKLRCLKTVVIGDISSDGVLKRTADTAFSWEEIL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme100758g00001 229 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 1 229 - -
Trme100758g00001 229 ProSitePatterns Zinc finger C2H2 type domain signature. 69 90 IPR013087 -
Trme100758g00001 229 Gene3D - 22 228 - -
Trme100758g00001 229 Pfam NYN domain 139 222 IPR021139 GO:0004540
Trme100758g00001 229 CDD PIN_LabA-like 77 208 - -
Trme100758g00001 229 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 95 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme100758g00001 1 228 C2H2 Transcription Factor Family AT4G12240 66.228 2.27e-110 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trme100758g00001 NYN 2.5e-08 CL0280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme100758g00001 - - tpra:123908087 448.743