Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1007581g00001 ATGGATCGAACTATTGGAACTGGTTCATGGGAAGGTGAAGACAGCGGAAAAAGTATATTCGCCAAAAATACAAACCAACTCCTCGGTATAAAAAAACGTTATCGCTTTGAGAAGAGTAAGATTGATCCAGATGGTGGATGGATCTTGCACGAGTATAGCCTTGACCAATCTTTGATAAGCAATCCTTCG 189 0.4074 MDRTIGTGSWEGEDSGKSIFAKNTNQLLGIKKRYRFEKSKIDPDGGWILHEYSLDQSLISNPS 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1007581g00001 63 Gene3D NAC domain 1 63 IPR036093 GO:0003677|GO:0006355
Trme1007581g00001 63 ProSiteProfiles NAC domain profile. 1 63 IPR003441 GO:0003677|GO:0006355
Trme1007581g00001 63 Pfam No apical meristem (NAM) protein 3 54 IPR003441 GO:0003677|GO:0006355
Trme1007581g00001 63 SUPERFAMILY NAC domain 3 58 IPR036093 GO:0003677|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trme1007581g00001 NAM 2.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1007581g00001 - - tpra:123896066 108.227