Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme100740g00001 ACTGGTGGAGGCCGGCTTGTTATCTGTAGTGATGGTGTCTGGGATGCTTTAGCTGCAGAAGTGGCCCTTGATTGTTGCCGTGGCATGTCAGCAGAGTCTTCTGCACCACAGATTGTAAAGGAAGCTATACAAGCAAAGGGACTTAGAGATGATACAACCTGCATTGTTGTTGATATATTACCTCAGGAGAAGCCACCTGCTCCTGCGCCCCCACCAAAGAAGCCAGTGAAAGGAATGCTCAAGGCTATGTTTCGTAAAAAGTCTTCGGAATCATCTTCTATTGACAAAGAATACTTGGAGCCAGATGTGGTAGTGGAGCTGTATGAGGAAGGCTCTGCTATGCTTTCAGAGAGGTTTAGTTTTGTAATAGCTNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNAATAG 423 0.409 TGGGRLVICSDGVWDALAAEVALDCCRGMSAESSAPQIVKEAIQAKGLRDDTTCIVVDILPQEKPPAPAPPPKKPVKGMLKAMFRKKSSESSSIDKEYLEPDVVVELYEEGSAMLSERFSFVIAXXXXXXXXXXXXXXXX 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme100740g00001 140 Gene3D - 1 59 IPR036457 -
Trme100740g00001 140 SUPERFAMILY PP2C-like 3 59 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme100740g00001 Trme-Chr100740 1 588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme100740g00001 1 119 PP2C-type Phosphatase Gene Family AT1G47380 72.500 8.18e-55 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme100740g00001 - - gmx:100778367 181.8