Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10070g00001 ACACTTAAGGAGGAGCTTAATGTTGATGATGTTGAGGAGAAATGGACGTGGTTTCGACAAATTTTAGAAGCTTTAGAACACATACACGAGGCAGGAATAATTCATCTAGACTTGAAACCGAACAACATATTCCTAGATGGTACAAGTAACATCAAAGTCGGGGACTTCGGTCTTGCCGAGTTCTTCGAGTCAGATTCAGCTCATCCTGCTGATACAACTGAAGTTTCCAGTGATGACACTCAACAAAATAAACAAGCTGTTCAACAAAATAAACAAGCTGTGGTATGTTTATATACAGCTCCTGAAATTGATAAGGGATGGGCAAAAATTGATGACAAGGCTGACATGTACAGCTTGGGACTGATTTTCTTTGAGCTCTTTCATCCATTTAAGACAGAATCGGAGAAGATCGATACTTTATCCAGTCTGAAAAGAGGAGGGGTACTTCCAACTGCTTGGGTTGCTGAGTTTCCAAAACATGCATCCTTATTGCGGAAGTTAATTTCGCCAGATCCCTCAAAACGGCCATCTGCCGCAGAACTTCTGAATAATGCATCATT 560 0.4089 TLKEELNVDDVEEKWTWFRQILEALEHIHEAGIIHLDLKPNNIFLDGTSNIKVGDFGLAEFFESDSAHPADTTEVSSDDTQQNKQAVQQNKQAVVCLYTAPEIDKGWAKIDDKADMYSLGLIFFELFHPFKTESEKIDTLSSLKRGGVLPTAWVAEFPKHASLLRKLISPDPSKRPSAAELLNNAS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10070g00001 186 Pfam Protein kinase domain 16 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme10070g00001 186 Gene3D Transferase(Phosphotransferase) domain 1 2 186 - -
Trme10070g00001 186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 33 45 IPR008271 GO:0004672|GO:0006468
Trme10070g00001 186 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 6 184 - -
Trme10070g00001 186 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme10070g00001 186 SUPERFAMILY Protein kinase-like (PK-like) 10 183 IPR011009 -
Trme10070g00001 186 SMART serkin_6 1 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10070g00001 Trme-Chr10070 1 1220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10070g00001 9 185 CBL-interacting serine-threonine protein kinases AT5G01810 27.778 1.97e-15 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Trme10070g00001 Pkinase 7.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10070g00001 K16196 - mnt:21399154 202.216