Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme100633g00001 ATGGTGAAACCACTTCTGAATCTTGAGTCTCGTCGGGATAATACTGTTTTAATTTTGGAAATTTATGGAGAGGGTGGAATAGGCAAAACCACACTTGCCTTGGATATCTATAACAAGATCAAACATCAATTCGAAGCTGCGACTTTTCTTGATAATGTCAGAGAAAAATCAAACATGTGGTTTGATGGTATAGAAATTCTCCAAATGAAACTTCTGTCTGAGATGGGTGAGGAAACCGATAGTAGGTTTACAGCAGGATTCGAAATCAAGCACAGGCTACGCAATAAAAGAGTTCTTCTAGTTCTAGATAGCGTTGATTCAATAAAGCAATTAGAAGCGCTAGCCGGAGAATGTGATTGGTTTGGTTCTGGTAGCAGGATTATCATAACAACAAGGGACAAATCATTGGTAGATAACTATGAGATGAATGGTTTTATCATTGAAAAATATGAAATTGAAGAGATGAATGTTCAAGATTCTATGGAACTCTTTTGTTGGCATGCCTTCAATACGATTAATCCTGCAAAAAACTTTGAAG 538 0.3662 MVKPLLNLESRRDNTVLILEIYGEGGIGKTTLALDIYNKIKHQFEAATFLDNVREKSNMWFDGIEILQMKLLSEMGEETDSRFTAGFEIKHRLRNKRVLLVLDSVDSIKQLEALAGECDWFGSGSRIIITTRDKSLVDNYEMNGFIIEKYEIEEMNVQDSMELFCWHAFNTINPAKNFE 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme100633g00001 179 PRINTS Disease resistance protein signature 92 106 - -
Trme100633g00001 179 PRINTS Disease resistance protein signature 18 33 - -
Trme100633g00001 179 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 170 IPR044974 GO:0006952
Trme100633g00001 179 Pfam NB-ARC domain 11 170 IPR002182 GO:0043531
Trme100633g00001 179 Gene3D - 2 147 IPR027417 -
Trme100633g00001 179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 174 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme100633g00001 Trme-Chr100633 24 561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme100633g00001 21 168 WRKY Transcription Factor Family AT5G45050 34.211 2.01e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme100633g00001 - - tpra:123920924 230.335