Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme100527g00001 ATGCTGGTACTTCGTGATGGAAAATGGAGCGAAGAAGACGCTTCAGTGTTGGTCCCTGGAGACATAGTTAGTATCAAACTAGGTGACATTATTCCAGCCGACGCACGTCTCCTAGAAGGAGATCCTTTGAAGATTGATCAGTCTGCTCTTACTGGAGAGTCACTTCCTGTGACAAAACATCCTGG 185 0.4649 MLVLRDGKWSEEDASVLVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPG 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme100527g00001 62 PANTHER CALCIUM-TRANSPORTING ATPASE 3 61 - -
Trme100527g00001 62 FunFam Plasma membrane ATPase 1 62 - -
Trme100527g00001 62 Pfam E1-E2 ATPase 2 62 - -
Trme100527g00001 62 Gene3D - 1 62 - -
Trme100527g00001 62 SUPERFAMILY Calcium ATPase, transduction domain A 2 61 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme100527g00001 Trme-Chr100527 1 411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme100527g00001 3 62 Primary Pumps ATPases AT4G30190 91.667 2.06e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme100527g00001 K01535 - psat:127079422 122.094