Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme100513g00001 ATGATTCAAGATTGGTGTGTACAACACCGTTCCTACGGCGTCGAAAGAATCCCAACTCCACGTATTCCAGTAACCCAATACGAGGTTACTGATACGTGTACCAGGATTCTGTCGGCGGCGCAACAAGGGGATGAAAACAAGGTTATTGAATTGGTGAAGAAGATAAAGGGTTGGGGAAAAGAGAGTGAGAGGAACAAGAAATGTATAGTTTCAAATGGTGCTCCTCTTGTTCTTGCTAAGGTTTTTGATTCTTTCTCACGTGGTTCAATAGAGAAGAATTTTGTTGTTTTGGAAGAGATTTTGGAAGTGCTGACGTGGATGCGTCCTGTTCCTGAAGAGGGCAAAATGCTTCTTTRTTGCTTAAAGAAATGA 372 0.4194 MIQDWCVQHRSYGVERIPTPRIPVTQYEVTDTCTRILSAAQQGDENKVIELVKKIKGWGKESERNKKCIVSNGAPLVLAKVFDSFSRGSIEKNFVVLEEILEVLTWMRPVPEEGKMLLXCLKK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme100513g00001 123 PANTHER WDSAM1 PROTEIN 1 110 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme100513g00001 Trme-Chr100513 94 547 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme100513g00001 1 115 U-box Gene Family AT1G66160 47.826 1.53e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme100513g00001 - - lja:Lj0g3v0023039.1 192.2