Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme100382g00001 ATGCACGATATGCTTTTATCCATTGAGAAATTCAAAGCATCTTATCTGCCGCTTGTGCCGCCCATACTGGTGGCTATGCTGAACAACGCGGATGCAATTAAGAGCAAGTACGATCTGAGTTCCCTTCAGGCAGTGCTCTGTGGAGGGGCTCCTCTGAGCAAAGAGGTTACAGAAGGGTTTATTGAAAAGTACCCTGACGTTACTATATTTCAGGGTTATGGTCTGACGGAATCCTCTGGAGTTGGGAGTTCCACTGAATCTTTGGAAGAGACTCGTAAGTACGGCACGGCTGGGCTTGTTTCTGCTTCCACGGAGGCTATGATTGTTGACACTGAAACTGCTCAACCTTTGCCGGTTAATCGGACCGGTGAGCTTTGGCTCAGGGGTCCCACCATCATGAAAG 403 0.4888 MHDMLLSIEKFKASYLPLVPPILVAMLNNADAIKSKYDLSSLQAVLCGGAPLSKEVTEGFIEKYPDVTIFQGYGLTESSGVGSSTESLEETRKYGTAGLVSASTEAMIVDTETAQPLPVNRTGELWLRGPTIMK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme100382g00001 134 Gene3D - 1 81 - -
Trme100382g00001 134 Pfam AMP-binding enzyme 5 134 IPR000873 -
Trme100382g00001 134 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 134 - -
Trme100382g00001 134 SUPERFAMILY Acetyl-CoA synthetase-like 7 134 - -
Trme100382g00001 134 Gene3D Luciferase; Domain 3 82 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme100382g00001 Trme-Chr100382 228 630 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme100382g00001 1 134 Monolignol Biosynthesis Gene Families AT1G20510 67.910 4.11e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme100382g00001 K10526 - gmx:100811344 214.542