Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme100381g00001 GAACATGCTGAGCTCACTAAAGATCCTGACGGAGCTTATAGTCAACTCATTAGGCTGCAAGAAATGAAAAGTGATTCATCAGAAGAGTGTGGTTCTAATGACTCGGATAAGCTAGAAAACTNTGTAGATTCTGGAAGAGAGTCCAGCCAACGACCTTTAAGCCGTGGATCATCTGAGATTGGAAACAGCGGTCACAACTCATTCATAGTATCAAATTCTATGCCTGCCACACTAGAAGGAGGGTCTGAAGTTCTTCCTTCAGAAGCACCATCACATAAAAGTAGGATTCCAGATGTCCCATTTCTTCGCCTTGCTTATCTTAACAAACCTGAAATACCAGTGTTACTCATAGGGACTCTAGCAGCAGCAGTAACTGGAGCAATGCAACCTATTCTGGGACTTTTGGTCTCCAAGATGATAAATACATTCTTT 432 0.4213 EHAELTKDPDGAYSQLIRLQEMKSDSSEECGSNDSDKLENXVDSGRESSQRPLSRGSSEIGNSGHNSFIVSNSMPATLEGGSEVLPSEAPSHKSRIPDVPFLRLAYLNKPEIPVLLIGTLAAAVTGAMQPILGLLVSKMINTFF 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme100381g00001 144 Gene3D ABC transporter type 1, transmembrane domain 82 144 IPR036640 GO:0005524|GO:0016020
Trme100381g00001 144 MobiDBLite consensus disorder prediction 1 92 - -
Trme100381g00001 144 MobiDBLite consensus disorder prediction 22 44 - -
Trme100381g00001 144 MobiDBLite consensus disorder prediction 45 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme100381g00001 Trme-Chr100381 259 690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme100381g00001 2 144 Calmodulin-binding Proteins AT2G36910 23.490 8.97e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme100381g00001 K05658 - lja:Lj0g3v0323809.1 160.614