Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme100293g00001 ATGTGCATAAGCTTTTGTGCTGGAGTGAGTGCTTCAACAGCTCACACGTGGACAACACTTTCGGGTACAGGAGCTGATGATGTAAGGGTAATGACCCGTAAAAGTGTAGATGACCCAGGAAGACCAGCTGGCATTGTCCTTAGTGCTGCAACTTCTTTTTGGCTTCCAGTTACACCAAAAAGAGTTTTTGAATTTCTTAGAGATGAAAACTCAAGAAGTGAGGTAATCAAAGAATAA 237 0.4219 MCISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPAGIVLSAATSFWLPVTPKRVFEFLRDENSRSEVIKE 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme100293g00001 78 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 74 IPR042160 -
Trme100293g00001 78 SUPERFAMILY Bet v1-like 12 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme100293g00001 Trme-Chr100293 38 274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme100293g00001 1 74 Homeobox Transcription Factor Family AT1G05230 90.541 5.79e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme100293g00001 K09338 - gmx:100797992 146.362