Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme100004g00001 ATGTCCAATTCTTACCTCCAATTGTTGCTTCTTTTGGTTCTTTACATAATTTCAGCTAATTCAGCTCAACCTTATGAGGGAAACTATGGTGAAGCTGTGTTCACTCTACAAGTCCCAACATTAGAGGAAAACAACTTGGATAATCTCTTATCCTTTGGTTACTACCATAAAAGTTGTCCTCAATTTGAGTCCATTTTRCATAACAAAGTCAAAGAATGGATTAAGAAGGATGATACTTTAGCAGCTAGTCTCCTAAGATTGCATTTCCATGATTGCTCTGTTAGG 285 0.3614 MSNSYLQLLLLLVLYIISANSAQPYEGNYGEAVFTLQVPTLEENNLDNLLSFGYYHKSCPQFESILHNKVKEWIKKDDTLAASLLRLHFHDCSVR 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme100004g00001 95 ProSiteProfiles Plant heme peroxidase family profile. 49 95 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme100004g00001 95 PRINTS Plant peroxidase signature 83 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme100004g00001 95 PRINTS Plant peroxidase signature 59 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme100004g00001 95 SUPERFAMILY Heme-dependent peroxidases 32 94 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme100004g00001 95 Gene3D - 50 95 - -
Trme100004g00001 95 PANTHER PEROXIDASE 25-RELATED 14 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme100004g00001 95 ProSitePatterns Peroxidases active site signature. 81 92 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme100004g00001 Trme-Chr100004 229 513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme100004g00001 46 94 Peroxidase AT1G30870 59.184 1.00e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme100004g00001 K00430 - gmx:100527587 135.191