Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5153 ATGGATCACTTCTTCGCTCTGATTTGCCCTAATTCTCCATTTGTATGGGATGGAAAAGGATTCTCCGAGTGTTTCGAAGACATTGTTTTAGATTTTGCAGTGAATATAGTGACTATTGTTATGATTGTTGTGCTTGGAGTTAAACAAAAAATTGACGGTCGAGAAGCTCAGAGATCATTCACTCAGAAGACTCTGCCAGAGAAATTTGTCCTGGATTTTGTACCAGCCGTTGGAGCATGTTTTTCAGTTTTGGAAATAATTTTTCTGCTGAAGAAAGAACATGATGGTCACTTTATTGGATATCATAAGTGGTTATGTAGCTGTTCTGAGTTGTTGGTGTGGGCAAATGTCATTCTCTTTACGAAATGTGCAAGCAGAAGTCATACCATAGTCTTCAACCGTGTCCTATGTTTCTGGTGGATTCTAAAACCAATATTGGGGATTTTTCATTTGATAACAAAGTTTCCATCATTGGAGGTTTCAGTATGCATCATGGAAAGCTTAGTTGTCCTCTTGAATATCTCATTTGGCATAGTTATCAATGTGATCAGGATAAAGAGATCATCTTCCAAAAGCAGTTTATTGGAAGATCCACTTCTTTCCAATGGAGGGGACCTTGAGGAAGGTGGCAACGATGACCTTGGAAATAATGGTAACTTTTTGGATTTTATGACTTTCAAATTCATAAGTCCCGTGATGAATCAAGGTGTGCTAAAGCAATTGGACTCTGATGATCTTCTGCCGCTACTACCTGATATGAGTCCTTCTTACTGTCATGATATAATTTTGTCCAGTTGGCGAGCTCAAATGAGTAATAATGGTTCAAGCCCTTCCTTATTTAGAGCACTCTGTAATGCATATGGATTGCCATATCTCTGCCTTGGTTTATTGAAGGTGATAAATGATGGTATTGGTTTTGCGGGGCCATTGCTTCTCAATAAGCTGATCAAGTTTCTTCAGCAAGGTTCAGCAAGTTGGGATGGGTATTTACTTGCACTATCCTTGGGTATCGCATCAATAGTTAAATCTTTTCTAGATACACAATATACTTTTCGCCTTTCCAAACTGAAGCTAAAGCTGCGATCTAGTATCATGACACTAATCTATGAGAAGTGTCTATATGTGAACCTAGCAGAGCTTTCAAAATTCACAAATGGAGAAATTCAGACATTTATGTCGGTGGATGCTGACCGAACTGTCAACTTGTGTAATAGTTTCCATGATATTTGGAGTCTTCCTTTACAAATTGGAGTGGCGCTTTATCTTTTGTATACTCAAGTCAAATTTGCATTTGTGTCTGGATTAGCAATAACCATTTTATTAATACCAGTGAATAAATGGATATCAAAATTGATTGCAAGGGCCACTGAGCAAATGATGAAGGAGAAGGATGAAAGGATTCGCAGGACCGGGGAACTATTGACTTATATTCGCACTTTGAAGATGTATGGATGGGAGCTTCTTTTTTCAAGTTGGTTGATGGAAACAAGATCTTTGGAAGTCAAACACTTAGCTACTCGAAAATACTTGGATGCATGGTGTGTATTCTTTTGGGCTACAACACCATCACTATTTTCTCTTTGCACATTTGGACTGTTTGCATTGATGGGACATCAACTTGATGCTGCAACGGTTTTCACTTGTCTTGCTTTGTTTAACACTCTGATTTCACCACTTAATTCATTCCCTTGGGTGATTAATGGGTTGATTGATGCCTTCATATCCTCCAGACGGTTGAGTAGGTTTCTCTCTTGCCCTGAACATAGACGCAAAGTGGGAGAGAACAGTTCCTGTTCATCATCATTCCCGGGTAAACAGCCTGATTCTTTACAAGATTTAGCTGTCTCTATGCAAGATGCATGCTGCTCTTGGTCAAGTAGTGATGAAAAAGCATTAAATATGGTGTTGAATCATGTGACTCTTAGCCTATCAAAGGGTTCCTTTGTTGCAGTTATTGGAGAGGTTGGTTCCGGTAAATCATGCCTGTTATATTCAATTCTCGGAGAAATGCGGCTTGATCATGGATCTATTTATTCCAGTGGATCTATAGCTTATGTCCCACAGGTCCCTTGGATTATATCTGGAACAGTACGTGACAATATATTATTTGGGAAAAGCTATCATCCTGAAAGGTATGCAGATACAGTAAAGGCATGTGCATTGGATGTCGATATCTCATTGATGGTTGGTGGTGACATGGCTTATGTTGGAGAGAAAGGAGTGAACTTATCAGGTGGACAGAGAGCTCGTCTTGCTTTGGCAAGGGTATTGTATCATGACTCAGATGTTATTATGCTTGACGATGTCCTGAGTGCAGTTGATGTACAAGTTGCTCGGTGGATCTTACACAATGCCATTCTTGGTCCTCTTATGAAGGGAAAAACCCGATTGCTCTGTACCCACAACACTCAGGCAATATCTTCTGCTGATATGATTGTTGTATTGGACAAAGGACACTTAAAGTGGATGGGAAGTTCAGCTGACTTTCCAACTTCTTCATATACAGCATTCTCCCCATTGAATGAAATGGATTCAACTTCACATAATCAGAAATCTTGCAGCACAAATTCTTCTGTATCCAAGGAGCAGTCTCTTCCTGATAGAATTATCATGGATTCTCTAGAGGGAGCAGATGGTGTAATTGAAGTTGAGTTGAGGAAGGAGGGAAAAGTTGAACTTGGTGTGTATAAGAACTATGCTGCTTTTACTGGTTGGTTCATTGCCGTTATTATATGTCTATCAGCTATTCTGATGCAAGCTTCACGTAATGGAAATGATTTATGGCTTTCATATTGGGTGGATACCACAACGGAAGACGGTCAAACAAGTTACTCTATGTCTTTCTATCTGACTATACTATGTCTCTTTTGTATTATGAATTCCCTTTTCACATTGGTGAGGGCATTCTCTTTTGCATTTGGTGGCTTACAAGCGGCAACTAAGGTGCACAATAGACTACTCAGCAAGCTTATCAATGCACCTGTGCAATTCTTTGATCAGACCCCTGGTGGAAGAATACTGAATAGGTTATCTTCAGATCTCTATACAATAGATGATTCTCTTCCATTCATTATGAACATTCTCCTGGCTAATTTTGTAGGACTGTTGGGTATTGCAATTATTTTATCTTACGTACAGGTCTTCTTCTTAGTTCTGTTATTGCCCTTTTGGTATATCTACAGTAGACTTCAGTTCTTCTACAGGTCAACATCGAGAGAATTGCGAAGACTGGATAGTGTTTCTCGCTCTCCAATATATACATCCTTCACCGAAACACTTGATGGATCATCAACTATTAGAGCCTTTAAATCCGAGGACTTCTTCTTCGCCAAATTTACTGACTACGTAACATTATATCAGAAGACTTCCTATACAGAGATAGTGGCGAGTCTGTGGCTTTCCCTGCGTCTTCAGTTATTAGCTGCATTTATCATCTCATTCATAGCCCTGATGGCTGTTGCCGGGTCTCGTGACAGTCTGCCTATTAACTTTGGCACCCCAGGACTGGTTGGATTGGCCCTCTCGTACGCAGCTCCAATTGTGTCTCTGCTGGGGAGTTTTCTAACAAGTTTCACTGAAACAGAAAAGGAAATGGTTTCAATTGAAAGAGCCCTTCAATACATGGATATTCCCCAAGAAGAACAAGATGGATGTCTATACTTGAATCCAGATTGGCCAAATCAAGGAGTTATTGAATTCCAACATGTTACTTTGAAATATATGCCATCTTTACCAGCTGCGCTCTGCAATCTTAGTTTTAAAATTGAAGGAGGGACACAGGTTGGAATAATTGGAAGAACAGGTGCTGGAAAATCTAGTGTGTTAAATGCACTTTTTTGTCTTACTCCAATATGTGCAGGCTCCATCACAGTTGATGGCATGGACATTCGAAATATTCCTGTGAGAGAACTACGAACACATTTGGCTATTGTTCCTCAGAGTCCATTCTTGTTTGAAGGATCATTAAGGGATAACCTAGATCCATTCAAAAGGAACGATGACTCAAAAATTTGGGATGCACTGGAGAAGTGTCATGTGAAAGAGGAAGTAGAAGTAGCTGGAGGGCTGGATATTCTTGTAAAGGAAGGAGGGATGTCATTTTCAGTTGGCCAGCGGCAGCTTCTTTGCCTTGCACGTGCACTTCTCAAATCTTCAAAGGTTCTTTGTTTGGATGAATGCACTGCCAGTGTCGACATTCAAACTGCTTCACTGCTGCAAAGCACCATATCCAGTGAATGCAAAGGAATGACGGTGCTCACAATTGCTCACCGGATTTCAACTGTCATAAATATGGATAACATTCTAATTCTTGATCATGGGAACCTGGCTGAACAAGGAAATCCGCAGATTCTTCTGAAAGATGGCACCTCTATATTTTCTAGTTTTGTAAAAGCTTCATCCATGTAA 4407 0.3998 MDHFFALICPNSPFVWDGKGFSECFEDIVLDFAVNIVTIVMIVVLGVKQKIDGREAQRSFTQKTLPEKFVLDFVPAVGACFSVLEIIFLLKKEHDGHFIGYHKWLCSCSELLVWANVILFTKCASRSHTIVFNRVLCFWWILKPILGIFHLITKFPSLEVSVCIMESLVVLLNISFGIVINVIRIKRSSSKSSLLEDPLLSNGGDLEEGGNDDLGNNGNFLDFMTFKFISPVMNQGVLKQLDSDDLLPLLPDMSPSYCHDIILSSWRAQMSNNGSSPSLFRALCNAYGLPYLCLGLLKVINDGIGFAGPLLLNKLIKFLQQGSASWDGYLLALSLGIASIVKSFLDTQYTFRLSKLKLKLRSSIMTLIYEKCLYVNLAELSKFTNGEIQTFMSVDADRTVNLCNSFHDIWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISKLIARATEQMMKEKDERIRRTGELLTYIRTLKMYGWELLFSSWLMETRSLEVKHLATRKYLDAWCVFFWATTPSLFSLCTFGLFALMGHQLDAATVFTCLALFNTLISPLNSFPWVINGLIDAFISSRRLSRFLSCPEHRRKVGENSSCSSSFPGKQPDSLQDLAVSMQDACCSWSSSDEKALNMVLNHVTLSLSKGSFVAVIGEVGSGKSCLLYSILGEMRLDHGSIYSSGSIAYVPQVPWIISGTVRDNILFGKSYHPERYADTVKACALDVDISLMVGGDMAYVGEKGVNLSGGQRARLALARVLYHDSDVIMLDDVLSAVDVQVARWILHNAILGPLMKGKTRLLCTHNTQAISSADMIVVLDKGHLKWMGSSADFPTSSYTAFSPLNEMDSTSHNQKSCSTNSSVSKEQSLPDRIIMDSLEGADGVIEVELRKEGKVELGVYKNYAAFTGWFIAVIICLSAILMQASRNGNDLWLSYWVDTTTEDGQTSYSMSFYLTILCLFCIMNSLFTLVRAFSFAFGGLQAATKVHNRLLSKLINAPVQFFDQTPGGRILNRLSSDLYTIDDSLPFIMNILLANFVGLLGIAIILSYVQVFFLVLLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDFFFAKFTDYVTLYQKTSYTEIVASLWLSLRLQLLAAFIISFIALMAVAGSRDSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSIERALQYMDIPQEEQDGCLYLNPDWPNQGVIEFQHVTLKYMPSLPAALCNLSFKIEGGTQVGIIGRTGAGKSSVLNALFCLTPICAGSITVDGMDIRNIPVRELRTHLAIVPQSPFLFEGSLRDNLDPFKRNDDSKIWDALEKCHVKEEVEVAGGLDILVKEGGMSFSVGQRQLLCLARALLKSSKVLCLDECTASVDIQTASLLQSTISSECKGMTVLTIAHRISTVINMDNILILDHGNLAEQGNPQILLKDGTSIFSSFVKASSM* 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5153 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 615 829 IPR027417 -
Tpr7g5153 1468 SMART AAA_5 1257 1441 IPR003593 -
Tpr7g5153 1468 SMART AAA_5 645 819 IPR003593 -
Tpr7g5153 1468 ProSitePatterns ABC transporters family signature. 743 757 IPR017871 GO:0005524
Tpr7g5153 1468 CDD ABCC_MRP_domain1 615 818 - -
Tpr7g5153 1468 Gene3D - 594 865 IPR027417 -
Tpr7g5153 1468 Pfam ABC transporter 636 768 IPR003439 GO:0005524
Tpr7g5153 1468 Pfam ABC transporter 1249 1395 IPR003439 GO:0005524
Tpr7g5153 1468 ProSitePatterns ABC transporters family signature. 1367 1381 IPR017871 GO:0005524
Tpr7g5153 1468 Gene3D - 1218 1465 IPR027417 -
Tpr7g5153 1468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1231 1464 IPR003439 GO:0005524
Tpr7g5153 1468 Pfam ABC transporter transmembrane region 910 1158 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g5153 1468 Pfam ABC transporter transmembrane region 293 559 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g5153 1468 CDD ABC_6TM_MRP7_D1_like 294 579 - -
Tpr7g5153 1468 SUPERFAMILY ABC transporter transmembrane region 905 1213 IPR036640 GO:0005524|GO:0016021
Tpr7g5153 1468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 842 IPR003439 GO:0005524
Tpr7g5153 1468 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 909 1196 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g5153 1468 CDD ABCC_MRP_domain2 1229 1448 - -
Tpr7g5153 1468 CDD ABC_6TM_MRP7_D2_like 908 1208 - -
Tpr7g5153 1468 Gene3D ABC transporter type 1, transmembrane domain 280 587 IPR036640 GO:0005524|GO:0016021
Tpr7g5153 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1225 1455 IPR027417 -
Tpr7g5153 1468 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 296 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g5153 1468 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 189 1448 - -
Tpr7g5153 1468 PANTHER MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 7 189 1448 - -
Tpr7g5153 1468 Gene3D ABC transporter type 1, transmembrane domain 879 1217 IPR036640 GO:0005524|GO:0016021
Tpr7g5153 1468 SUPERFAMILY ABC transporter transmembrane region 285 587 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5153 Tpr-Chr7 59081305 59095677 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5153 587 866 Calmodulin-binding Proteins AT2G36910 27.687 3.11e-19 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5153 K05674 - gmx:100814181 2396.31