Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5150 ATGGTATGGTTGGAGTTGAGTTCAAATGGGATCAGAAGTGCTTGTTTGGTCATCTTTATCATATCATTCTCTATACTCATATTAACACTCACCTCCAACTTTGGTCATTTTGAGTTGTTTTCAAAAGATATAAATGGAAGAGGTCAAAATTTGACAACTCAATGTTTGCCATTGAGATCAGGAATAATATCCCAAAACATCACAAATAATGAATTGGAAACCAAAAATTCTACAGAGTCAAATATAGGATCAACAAATAGTTCCTCCTCATCAACTAGAAATCATGCTGATAAATTCCTTGATGGACTTATACCTTCTGGATTTAATAAAGGATCATGCTTAAGTAGATATCAATCCTACTTATACAGAAAAGTATCACCTTATAAACCTTCTCCATATCTCATATCCAAACTTCGCAATTATGAAGATCTTCACAGAAGATGTGGACCTCATACTAGAGCTTACAAGAGAACCATGGTACATCTTAATAGTTTCAAATCCAATGTTACTACTATTGGATCATGTAAGTACATAGTATGGACACCTGCTAATGGCTTAGGGAACAGAATTGTTAGCATGGCTGCAACATTCCTTTATGCAATCCTCACTGACCGCGTCCTACTAGTGAAGTTTCAAGATGACATGGTTGGCTTATTTTGTGAACCGTTCCTCAACTCATCATGGTTATTACCTAATGCTAAAGAATTTCCTTTTAGTACTGACGACAACGGAAAAAAAGATTTTGAAACATATGATATTGTGATGAAAAGGGATAGGGAAAACAATTCAAAGGAATTATTATTACCGTCGGTTATGCATCTCAAGATAGAACACACAGATGATGAACATGAAATGTTTTTCTCTTGTGATCATAGCCAACATCTTCTACATAAAGTTCCAATCTTGATTTTAAGATCAGATCAATACTTTGTACCTTCTCTTTTTATGGGTCCATCCTTCGGTCAAGAGCTTAGAAAAATGTTCCCAAACAAAGAAACTGTTTTTCACCATTTGGGACGCTACCTATTTTTCCCTTCAAATGATGTATGGGGACCAATCAAAAGGTTCTATCAAGCATATTTGGCCAAGGCAGATGAGAAGATTGGAATCCAAGTAAGAGTATTTTATCCTAATATCAGTTCACACCAAACAATCACAAAGCAAATTTTGACCTGCGCCCAAAAAAATAAGATACTGCCCAATTTTGCCGCAAAAGATTCAAAAGAATCTCCACGGAAAAATCAAACTTTGAAGTCGGTTTTGGTAGCATCTTTATATCGAGAGTATGGTGAGAACCTTAGAACGATGTATTTGAATAAACCAAGTGTTACAGGGGAAATCATAGGGGTTTATCAGCCAAGTCACGAAGAGCATCAAAAGTTTGGTGATAACTTGCAAAACAAGAAAGCATTGACAGAAATGTATCTTTTAAGTTTATGTGATGTTTTGGTAACTAGCTCTCTATCAACTTTTGGGTATGTGGCTCAGAGTTTGGGAGGCCTAAAGCCATGGGTTCTTTACAAATTACAAGACAACAACCTCCCAGATTCGCCATGTGTGCAAGATGTCTCTATGGAGCCTTGTTATCATATACCTCCTAAACTTGATTGCATGGAGAAACCTATAGATGATGATGTTGGTAAAGCTTTTCCTTACATGAGGAGATGTGTGGACTATAATTTGGGTGTAAAGTTGGTCAATGATCTTCAGTAG 1713 0.3619 MVWLELSSNGIRSACLVIFIISFSILILTLTSNFGHFELFSKDINGRGQNLTTQCLPLRSGIISQNITNNELETKNSTESNIGSTNSSSSSTRNHADKFLDGLIPSGFNKGSCLSRYQSYLYRKVSPYKPSPYLISKLRNYEDLHRRCGPHTRAYKRTMVHLNSFKSNVTTIGSCKYIVWTPANGLGNRIVSMAATFLYAILTDRVLLVKFQDDMVGLFCEPFLNSSWLLPNAKEFPFSTDDNGKKDFETYDIVMKRDRENNSKELLLPSVMHLKIEHTDDEHEMFFSCDHSQHLLHKVPILILRSDQYFVPSLFMGPSFGQELRKMFPNKETVFHHLGRYLFFPSNDVWGPIKRFYQAYLAKADEKIGIQVRVFYPNISSHQTITKQILTCAQKNKILPNFAAKDSKESPRKNQTLKSVLVASLYREYGENLRTMYLNKPSVTGEIIGVYQPSHEEHQKFGDNLQNKKALTEMYLLSLCDVLVTSSLSTFGYVAQSLGGLKPWVLYKLQDNNLPDSPCVQDVSMEPCYHIPPKLDCMEKPIDDDVGKAFPYMRRCVDYNLGVKLVNDLQ* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5150 570 Pfam Xyloglucan fucosyltransferase 83 537 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tpr7g5150 570 Gene3D - 172 288 - -
Tpr7g5150 570 PANTHER FUCOSYLTRANSFERASE 2-RELATED 15 569 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tpr7g5150 570 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 15 569 - -
Tpr7g5150 570 Gene3D - 352 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5150 Tpr-Chr7 59067319 59069495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5150 92 566 Xyloglucan Fucosyltransferase1 AT2G03220 50.943 1.49e-162 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5150 K13681 - gmx:100809919 567.77