Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5148 ATGCCTTCAAGACAAATACCTTCTACAACAAGTTCCAATTTTTTCACCAAACCCAAGTTCATATTCATAGCACTCACCATTTCAGCTTCTGTTGTGATTTTCTTCTCAATCCTTTACTTCCTTTACCATCTTTGGCATTCTCTTGTACACAGAGCCAAGACCATCCCTTTTGATGCTAGTGCTCCTTTGAAGCTCCAAAGATTCTCCTACAAAGACTTAAAGCTAGCCACCAATGCCTTTGACACTTCCAATATCATTGGCAAAGGTGGTTCTGGTACTGTTTTCAAGGGTCTACTTAAAGATGGAAAATTTATTGCCATCAAACGCTTGGACTCATTGTCTTTGCAATCAGAGAGAGAGTTTCAAAATGAGTTGCAGATTCTTGGAGGGTTGAGATCACCCTTTTTGGTGACCCTTTTGGGCTATTGTGTTGAAAAGAATAAGAGAATTTTGGTGTATGAGTATATGCCTAACACAAGCTTGCAAGATTCACTCTTTGGTGATGAGTGTTTTGGTTTGAGTTGGGAAAGAAGGTTTTGCATAATAATGGATGTTGCTAGAGCATTGGAGTTTTTGCACCTTGGATGTGATCCACCTGTGATTCATGGTGATATTAAGCCAAGCAATGTGTTGCTTGATGCTGAGTTCCGCGGGAAGATCTCGGATTTTGGTTTGTCAAGGATTAAGGTGGAGGGTGAATTTGGAGCTGACTTGTTTAGCCAGGATTTGGGGAAGAGTCAAGATCTTTGGAAAAGCCAAGACCTTTCAGGTAATTTGACTGCAGAAACTCCTGTAATTGGCACTCCTGTTGAGAGTGTTAGTGAAGTTGATTTTGCTCTTGCTTTGCAAGCTTCTTCTTCATCCAAAAATAGTAGGACTTGTTTAAATGTTAAAGCTTTGAACTTGAACTCTTTGAATTATAATGCCAATATTGTTGGTGAAAGTGAAAGTAGGACTAGTGTAAATACAAAGGGTAAGGAAATTTCAAGTTTGGATATAGGAGGAGGAAGGGATGATTGGAATAATAATAATAATATGTTTGTTCCTTATGATGATGAGTTTTATAGCACTGATTATAGTAAGGAGTTGGCTTTTAATAATGCTTCTTGTTTGGTTGATGATGAGAAGGACAATGGGAAACAATGGGGAAAAGATTGGTGGTGGAAACAAGATGGAAGTGGTGAGTTATGTAGTAAAGACTATGTCATGGAGTGGATTGGAAGTCAGATTTGTCCATCAAATGCTGATTGGGATGATGGTATTGATAGTACTAAGAACAACAACATTCAGGAGAAATCAGAGTTGGAAAATTCAAGTCCAATAGGTAAAACCAGTGATGCAATTGCAAATGGACCACAATTACAGGTATCTGTGATGGAAGATGCAGATAATGGAGTTGTTGATATGAAAGAACTGAAGGGAAAGAAAAGCCACAAGATGAAGAATAGGAAGATGCAAGAGTGGTGGAAAGAAGAACATCTTGCTGAATTAAGCAAGAAGAATTCCAACAAGCTGAAAAGTCTTCAAACTAAATGGAAGAAAGGATTGAAAGTGATGCCTCATTTTGGTTTGGGTAGAAGGTTCTATCTTTGCCGACGTAATAAGAACTATGGAGAGGAAGGACATCATGAGTGTGAACAAAATGGTGAGTTTAGCTTCAGAAGAGGTTGGAGGAAAAAAAGCACGCGTTCGATTGGAAGTGACATGTGGAGTGGAGATCTTTTCAGCCGCGAACTCAGCAGCACAACTAGTATGAGAGGTACACTGTGTTATGTAGCACCAGAATATGGAGGGTGTGGATTCTTAATGGAGAAAGCTGATATATACAGTTTTGGAGTTTTGATTCTTGTAATTGTGTCAGGTAGAAGACCATTACATGTTCTTGCATCTCCTATGAAGCTAGAGAAAGCTAACTTAATTAGCTGGTGTAGACACTTGGCTCAAGCTGGTGGCAGTAACATTTTAGAACTAGTTGATGAAAAATTGAAACAAGATGATTACAACAAGGAACAAGCAAGCATGTGTATCAACTTGGCACTCACTTGTTTACAGAAAATTCCAGAGATGAGGCCAGATATTGGAGACATTGTTAAGATTTTAAAGGGGGAGATGGAACTTCCACCACTTCCATTTGAGTTCTCTCCTTCTCCACCTTCCAGATTATACAGCAGATCAAGGAGAAAACAGAAGACCAATGTAGAATAG 2205 0.3896 MPSRQIPSTTSSNFFTKPKFIFIALTISASVVIFFSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKDLKLATNAFDTSNIIGKGGSGTVFKGLLKDGKFIAIKRLDSLSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRILVYEYMPNTSLQDSLFGDECFGLSWERRFCIIMDVARALEFLHLGCDPPVIHGDIKPSNVLLDAEFRGKISDFGLSRIKVEGEFGADLFSQDLGKSQDLWKSQDLSGNLTAETPVIGTPVESVSEVDFALALQASSSSKNSRTCLNVKALNLNSLNYNANIVGESESRTSVNTKGKEISSLDIGGGRDDWNNNNNMFVPYDDEFYSTDYSKELAFNNASCLVDDEKDNGKQWGKDWWWKQDGSGELCSKDYVMEWIGSQICPSNADWDDGIDSTKNNNIQEKSELENSSPIGKTSDAIANGPQLQVSVMEDADNGVVDMKELKGKKSHKMKNRKMQEWWKEEHLAELSKKNSNKLKSLQTKWKKGLKVMPHFGLGRRFYLCRRNKNYGEEGHHECEQNGEFSFRRGWRKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGGSNILELVDEKLKQDDYNKEQASMCINLALTCLQKIPEMRPDIGDIVKILKGEMELPPLPFEFSPSPPSRLYSRSRRKQKTNVE* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5148 734 SMART serkin_6 80 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g5148 734 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Tpr7g5148 734 SUPERFAMILY Protein kinase-like (PK-like) 60 720 IPR011009 -
Tpr7g5148 734 Gene3D Transferase(Phosphotransferase) domain 1 557 706 - -
Tpr7g5148 734 Gene3D Transferase(Phosphotransferase) domain 1 156 269 - -
Tpr7g5148 734 MobiDBLite consensus disorder prediction 715 734 - -
Tpr7g5148 734 Pfam Protein kinase domain 82 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g5148 734 PANTHER OS08G0275200 PROTEIN 1 733 - -
Tpr7g5148 734 PANTHER OS07G0586332 PROTEIN 1 733 IPR044576 -
Tpr7g5148 734 Gene3D Phosphorylase Kinase; domain 1 47 155 - -
Tpr7g5148 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Tpr7g5148 734 ProSiteProfiles Protein kinase domain profile. 80 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5148 Tpr-Chr7 59054041 59056558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5148 565 700 Receptor kinase-like Gene Family AT3G58690 31.387 8.51e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Tpr7g5148 Pkinase 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5148 - - ccaj:109812677 1125.54