Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5147 ATGAATCAGACTGACACGGCTTCTGTATTGTCTGAAACCATTGGATACATCAAGTTTCTTCATGGTCAAATTGAGCTGTTGGATGACACTGGCCTAAAAAGAAAGGGTGCTCCAATTCCAAACCAGACTGCAAAAGCGAATAAGGGAAAGAACTTGAGGACTAGAGGGTTGTGCTTAGTCCCTATGTCAAGCCTTTGTCCTGCACACAACATGTTGGAAGCACAAATGGAGCTGAATATTTGCAGGGAGGCGTGGAAATGA 261 0.4406 MNQTDTASVLSETIGYIKFLHGQIELLDDTGLKRKGAPIPNQTAKANKGKNLRTRGLCLVPMSSLCPAHNMLEAQMELNICREAWK* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5147 86 PANTHER TRANSCRIPTION FACTOR BHLH114 4 72 - -
Tpr7g5147 86 CDD bHLH_AtbHLH_like 1 27 IPR045239 -
Tpr7g5147 86 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5147 Tpr-Chr7 59051935 59052820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5147 3 67 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 46.479 3.97e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5147 - - sspl:121802096 70.0922