Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5127 ATGGAGTACTACTCAAATATAATTAATAGTAATGGTGCGGGGTTAGTGTTGATGATGTTTTTCCTTGAAGTTGCAGTGATGTGTTCCAAAGGTAGTAGTAGTAGTAGTAGTATGATGATAATCGTATCTAAGGATGGAAGTGGAGATTATAAAAGCGTGGGTGAAGCTATCAGCAATGCTCCTGATTATAGTAAGCAACCTTACAATATTCACATTTTGGGAGGCATTTATGAAGAGTACATTCTGATTCCACCAAGTAAGACTAATATTAAGCTCCTAGGTCATGGTTCAACCCACACGATAATACTGGGACGCCAAAATGGTTCCACCATAGACATCCGTGGAAATGGGTTCATGGCACAGAACATTGGATTTGTGAACTCAGCGGGTCTAGATGCAAGCGCTGCAGTGGCAGTTCGTAACGAGGCAACCAATAGCATTTTCTTTCAATGCTCAATCCAAGGATTCCAAGACACCTTATGGGCAGTTTCAGGCAGACAATTCTACAAGAACTGTGAAATCTACGGTACCGTGGATTTCATCTACGGCAATGCAGCCGCTGTATTTCAAGACTGCATGATTTACGCACGCTATAGACAGTTTGTGACATTCACCGCTCAATCACGGGAGAGTCCAAACGAGAAGACAGGTTTCACATTCCAACGTTGTAAATTCAGCATGTCACCTGAGGATGAGAACAAAAAGTCAGAGGTGGTACGTGCCACGTTAGGACGTCCTTGGAGAGCATATTCCACTGTGGCTATACTGCAGTGTTACATAGATTCCATGGTGGATCCTGGAGGTTGGGAACAGATGCCAGGACAGCCCATTGCTGATAAGGTTACTTATGTGGAGTATAAGAATGTTGGTCCTGGATCTAACACTGATGGTAGAGTGAATTGGCCTGGTGTTAGAGTTCTTGGCAATCCAAATGAAGCACTCCCTTTCACAGCTTCCTATCTATTGGATGCTCACTCTTGGATTCCATCTACAGGTGTTCCATATGATAGTGGACTTTAA 1020 0.4324 MEYYSNIINSNGAGLVLMMFFLEVAVMCSKGSSSSSSMMIIVSKDGSGDYKSVGEAISNAPDYSKQPYNIHILGGIYEEYILIPPSKTNIKLLGHGSTHTIILGRQNGSTIDIRGNGFMAQNIGFVNSAGLDASAAVAVRNEATNSIFFQCSIQGFQDTLWAVSGRQFYKNCEIYGTVDFIYGNAAAVFQDCMIYARYRQFVTFTAQSRESPNEKTGFTFQRCKFSMSPEDENKKSEVVRATLGRPWRAYSTVAILQCYIDSMVDPGGWEQMPGQPIADKVTYVEYKNVGPGSNTDGRVNWPGVRVLGNPNEALPFTASYLLDAHSWIPSTGVPYDSGL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5127 339 Pfam Pectinesterase 40 323 IPR000070 GO:0030599|GO:0042545
Tpr7g5127 339 Gene3D - 33 339 IPR012334 -
Tpr7g5127 339 SUPERFAMILY Pectin lyase-like 34 338 IPR011050 -
Tpr7g5127 339 PANTHER PECTINESTERASE 16 338 - -
Tpr7g5127 339 PANTHER PECTINESTERASE 16 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5127 Tpr-Chr7 58886983 58889985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5127 41 339 Carbohydrate Esterase AT3G05620 42.222 6.37e-82 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5127 K01051 - gmx:102665195 441.425