Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5126 ATGGCAGCAACAGAACAAAAACAAGAAGAAATAATATTCAGGTCTAAACTTCCAGACATATACATCCCAAAACACCTACCACTTCATTCTTATTGCTTTGAAAATCTCTCCCAATTTGGTTCACGTCCATGTCTCATCAATGCACCCACCGGAAAAGTATACACCTACGACGACGTGGAAGTCACCTCTCGTAAAGTTGCCTCTGGTCTCAACAGATTGGGAATCCAACAGGGTGATGTCATCATGATCCTCCTCCCCAATTCCCCTGAATTTGTCTTCTCCTTTCTGGCCGCTTCTTATCTCGGTGCCATAGCCACAGCAGCCAATCCTTTCTTCATGGCTGCGGAGATTGGAAAGCAAGCAAAAGCCTCCAAAGCCAAGTTGATCATAACACAGGCATGTTACTACGACAAAGTCAAGGAATTGTTGTCATTGGATGATGATAATGATCATGATGATGTCATCGTCAATAAGAATAAGAAGAAGTTGGTGCTCATAGACTCTCTCCCTCCATCTACATCTACATCATCTACAGTTCATTTCTCAACACTGATCGATGATGATGCTGATCATCAGGAGGAATTACCGGAGGATGTGAAGATTGAACCTGACGATGTGGTGGCGCTTCCATATTCATCAGGAACAACGGGTCTACCAAAAGGGGTGATGTTAACACACAAGGGATTAGTGAGCAGCATAGCGCAGCAGGTAGATGGAGAGAATCCAAATCTATATTACAGCAGTGAAGATGTGATACTGTGTGTACTTCCTCTGTTTCACATTTACTCTTTAAACTCTGTTTTGCTATGTGGGTTAAGAGCCAAGGCTACTATTCTTTTGATGCCTAAATTTGACATAAATGCTTTCTTGAGTCTTGTCAATAAACATGGAGTTACAGTTGCACCGGTAGTACCTCCGATTGTTTTGGCGATTGCAAAGTCACCGGATCTTAACAAATATGATCTGTCTTCAATAAGGATATTGAAATCAGGAGGTGCTCCACTTGGGAAAGAACTTGAAGACACTGTTAGAACCAAATTTCCCAAAGCAATACTTGGACAGGGATACGGAATGACTGAGGCAGGGCCAGTGTTAACGATGAGCTTAGCATTTGCAAAAGAAGCAGTGACTGTGAAACCAGGAGCATGTGGAACAGTTGTAAGAAATGCAGAGATGAAGATTGTGGATCCTGAAACTGGTAATTCATTACCTAGAAACCAATCTGGTGAAATATGCATAAGAGGAGACCAGATCATGAAAGGTTATCTAAATGATGTGGAGGCAACAGAGAGAACAATAGACAAAGAAGGTTGGTTGCATACAGGTGATATTGGGTATATTGACGATGACGATGAGTTATTCATTGTTGATAGATTGAAGGAATTGATCAAATACAAAGGATTTCAAGTTGCTCCAGCTGAACTTGAAGCTCTTCTTCTTTCACATCCCAAAATCTCTGATGCTGCTGTTGTCCCAATGAAGGATGAGGCTGCTGGAGAGGTACCTGTTGCATTTGTGGTGAGATCAAATGGTCACACTGACTTAACCGAGGATGAAATTAAGCAATTTATCTCCAAACAGGTGGTGTTTTACAAAAGAATAAATCGAGTATTCTTCATTGATGCAATTCCCAAGTCACCGTCAGGCAAAATTTTGCGTAAGGATCTCAGAGCAAAGTTAGCAGCAGAAGCTGTTTCAAATTGA 1704 0.4155 MAATEQKQEEIIFRSKLPDIYIPKHLPLHSYCFENLSQFGSRPCLINAPTGKVYTYDDVEVTSRKVASGLNRLGIQQGDVIMILLPNSPEFVFSFLAASYLGAIATAANPFFMAAEIGKQAKASKAKLIITQACYYDKVKELLSLDDDNDHDDVIVNKNKKKLVLIDSLPPSTSTSSTVHFSTLIDDDADHQEELPEDVKIEPDDVVALPYSSGTTGLPKGVMLTHKGLVSSIAQQVDGENPNLYYSSEDVILCVLPLFHIYSLNSVLLCGLRAKATILLMPKFDINAFLSLVNKHGVTVAPVVPPIVLAIAKSPDLNKYDLSSIRILKSGGAPLGKELEDTVRTKFPKAILGQGYGMTEAGPVLTMSLAFAKEAVTVKPGACGTVVRNAEMKIVDPETGNSLPRNQSGEICIRGDQIMKGYLNDVEATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPKISDAAVVPMKDEAAGEVPVAFVVRSNGHTDLTEDEIKQFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAEAVSN* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5126 567 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 7 562 - -
Tpr7g5126 567 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 562 - -
Tpr7g5126 567 Gene3D - 461 564 IPR045851 -
Tpr7g5126 567 CDD 4CL 22 556 - -
Tpr7g5126 567 Gene3D - 10 460 IPR042099 -
Tpr7g5126 567 SUPERFAMILY Acetyl-CoA synthetase-like 12 563 - -
Tpr7g5126 567 Pfam AMP-binding enzyme 34 465 IPR000873 -
Tpr7g5126 567 Pfam AMP-binding enzyme C-terminal domain 474 550 IPR025110 -
Tpr7g5126 567 ProSitePatterns Putative AMP-binding domain signature. 209 220 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5126 Tpr-Chr7 58881785 58885859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5126 4 528 Monolignol Biosynthesis Gene Families AT1G51680 68.501 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5126 K01904 - gmx:547944 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g5126 7 58881785 58885859 Tpr7g5126 7 58881785 58885859 ECH