Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5120 ATGGGCGCGCGCTCTAATTTGATTGTGCGCGCACATGTAGCATTTAATAATAATAATAATAATAATAATGTCAAGGCCTTGGTTGTTTTTGTGGTATTATTACTACTTTCATGCACAAGCATGTCAATGTCACCTTCGGATGCTGAGGCTCTAATAAAGTTCAAGGGTTCATTAACAAATGCGGTGTCCCTCAGCAGTTGGGATCCATCCATAAACCCAAAACCACCTTGCACCGGAAACATTTCCAATTGGGTGGGCTTGTTTTGCCTGAATGACAGGGTGTTGGGGTTACGCCTTGAGAGCATGGGGTTAACCGGAAATATGGAATTGGAATCTCTTTCTTCAATGCCGATGTTGAGGATGGTTAGCCTGATGAACAATACCTTTGTGGGTCCCTTGCCCAACATCAAGATGTTGCCCCATTTGAGGTCTATCTACTTGTCCTATAATCATTTCTCAGGACAGATACCTGACGATGCATTTACGGGTATGCCTAGGTTGAGGAAAGTGTATTTGTCTAATAACGAGTTCACCGGTAAAATTCCATCCTCTCTCGCTATCTTGCCTACTCTCCTCGTCCTCAGGCTTGACGCAAACAAGTTTCAAGGTGAGATCCCCAATTTTCATCACAAGAATAATTTGAAGATTATCAACTTCTCTAACAATAACTTAGAGGGTCCCATCCCACCTAATCTAAGAACCTTTGACGCCTCCTCTTTTAAAGGAAACACACTTCTATGTGGGCCTCCTTTGACGAATAGTTGTGAATTAGCAAATCCCAAAATGCTTGTTATGAAAACTTTACTTATTGTGATGATGATAGCCTTTATAGTAGCCATTGTGGTTTCAATATTGGTCATCTCCCGTTTGAGGTCCCAAAAGAAGCAATTAAACGAAGAACATTATTCTACAACGTCAAAATTTCATACACAAGCATCTAGCAAATATGTTAAGCCTCCTGCAGTTTATGTGAAAACTAAAAGTTTGGCCGAACACTATGATCCCAGAAGTCCTAAGCCAGATCAGTACAGTCATGGTCATTCCAAAAAGGAAAAGGGCGAACAAGGAAAACTTATATTTCTCAGGAAGGATGGACTCAAATTTGATTTACAGGATTTACTAAAGGCCTCCGCTGAAATTCTAGGAAGCGCGTCATTCGGTTCATCCTACAAAGCCGTGATCTTGGATGGCCAAGCCGTGGTTGTCAAGAGGTACAAGCAAATGAACAATGTGCAAAGAGAAGAGTTCCATGAGCATATGAGAAGGCTAGGAAACCTCAGTCATCCCAATGTTCTACCTCTCATTTCTTATTATTATAGAAGAGAAGAAAAACTTTTGATCTCTTCCTTTGTTCACAATGGTTGTTTGGCCAGTCATCTTCATGGTAACCACAACTACCAGAAGCCAGGACTTGATTGGGCAACCCGTTTGAAAATCGTGAAAGGTGTAGCGAGGGGTTTGTCATATCTATATAGTGCACTCCCAAGCGTGATTGTGCCTCATGGTCATCTAAAATCTTCCAATGTACTTTTAGATGAATCCTTTGAACCTCTGCTCACTGATTATGCGCTCAGTCCTTTGATCAATCTTGACCACGCACAACAAATCATCATGCCTTACAAATCCCCGGAGTATGCTCAACTTGGGCGCATTACAAAGAAAACTGATGTGTGGAGTTTTGGGATTCTAATATTAGAGATTCTGACGGGTAAATTCCCAGAGAACTATATTACAGCAAGGCATAATAGTGATTCTGACTTAGCCAGTTGGGTAAATATGATGATTACCGAGAAACGCACAAGTGATGTATTTGACGTAGAGATGGGAGGAGTAGGTACTAGTAAAGCTGAATTGCTCAAACTCTTAAAGATTGGACTCGGTTGTTGTGAGGAGAATGTAGAAAGAAGGTTGGACATCAAAGAGGCTTTAGAGCAGATTGAAGACTTGAATGAGGGTCAAACAAGTACTACTGATCATACTGTTGGAGAATACTCTTCCTCCCTTACCACCACTACTACTGAAAGGGATGCTTACAGAGCTGTGTGA 2046 0.4135 MGARSNLIVRAHVAFNNNNNNNNVKALVVFVVLLLLSCTSMSMSPSDAEALIKFKGSLTNAVSLSSWDPSINPKPPCTGNISNWVGLFCLNDRVLGLRLESMGLTGNMELESLSSMPMLRMVSLMNNTFVGPLPNIKMLPHLRSIYLSYNHFSGQIPDDAFTGMPRLRKVYLSNNEFTGKIPSSLAILPTLLVLRLDANKFQGEIPNFHHKNNLKIINFSNNNLEGPIPPNLRTFDASSFKGNTLLCGPPLTNSCELANPKMLVMKTLLIVMMIAFIVAIVVSILVISRLRSQKKQLNEEHYSTTSKFHTQASSKYVKPPAVYVKTKSLAEHYDPRSPKPDQYSHGHSKKEKGEQGKLIFLRKDGLKFDLQDLLKASAEILGSASFGSSYKAVILDGQAVVVKRYKQMNNVQREEFHEHMRRLGNLSHPNVLPLISYYYRREEKLLISSFVHNGCLASHLHGNHNYQKPGLDWATRLKIVKGVARGLSYLYSALPSVIVPHGHLKSSNVLLDESFEPLLTDYALSPLINLDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYITARHNSDSDLASWVNMMITEKRTSDVFDVEMGGVGTSKAELLKLLKIGLGCCEENVERRLDIKEALEQIEDLNEGQTSTTDHTVGEYSSSLTTTTTERDAYRAV* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5120 681 Gene3D Ribonuclease Inhibitor 44 209 IPR032675 -
Tpr7g5120 681 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 23 659 - -
Tpr7g5120 681 Gene3D Transferase(Phosphotransferase) domain 1 451 673 - -
Tpr7g5120 681 SUPERFAMILY Protein kinase-like (PK-like) 379 648 IPR011009 -
Tpr7g5120 681 MobiDBLite consensus disorder prediction 333 352 - -
Tpr7g5120 681 MobiDBLite consensus disorder prediction 650 681 - -
Tpr7g5120 681 Gene3D Ribonuclease Inhibitor 210 255 IPR032675 -
Tpr7g5120 681 Gene3D Phosphorylase Kinase; domain 1 342 450 - -
Tpr7g5120 681 Pfam Leucine rich repeat N-terminal domain 45 89 IPR013210 -
Tpr7g5120 681 ProSiteProfiles Protein kinase domain profile. 375 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g5120 681 Pfam Protein tyrosine and serine/threonine kinase 379 578 IPR001245 GO:0004672|GO:0006468
Tpr7g5120 681 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 659 - -
Tpr7g5120 681 Pfam Leucine rich repeat 140 201 IPR001611 GO:0005515
Tpr7g5120 681 SUPERFAMILY L domain-like 74 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5120 Tpr-Chr7 58835427 58837567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5120 23 671 Receptor kinase-like Gene Family AT5G35390 46.786 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr7g5120 PK_Tyr_Ser-Thr 3.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5120 - - pvu:PHAVU_005G185800g 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g5120 7 58835427 58837567 Tpr7g5120 7 58835427 58837567 ECH