Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5109 ATGGAAAACGAAGGTAACAACGATGGCAGTGAAAATCCAGTTGCAATCACCGGAAGTGGAATCGATACCGACGGCGGTGAAAGTTTGCAGATCGGAAGTGAAATCGATACCAACGGCGGTGAAAGTGAAGAAAAACAGATCGGAAGTGAAATCGATACCAACTACGGCGGTGAAAGTCAGCAGATCGGAAGTGAAATCGATACCAACGCCGGTGAAAGTAAGGAAGAACAGATCGGAAGTGAAATCGACGGCGGTGAACGTGAGGAAGTACAGACCGTAAGTGAAACCGATGCCGACTTCCGCAAGATGTTTGGAATTTCTATTCCTCGTCAAAACATCGTCGTCGAGAATGAAGAAGCAAAGGCTGATATCATTCGTCGTCGTCGTAAGGACTGCGACAAAGGATTCTTCTCAAACTATGACGATGTCACTGTGCATCGGAATATGATACAGGACACTCATCGGATGGAGGCCTATAACTCGGCAGTGCTTTTTTATAAGGATCGCATAGAAGGGAAAGTTATTGTTGATGTTGGCTGCGGCACTGGTATTTTATCCATTTTCTGTGCAAAGGCTGGAGCTAGGAAGGTTTACGCCATTGAGGCGTCTCAGATGGCTTTACATGCTAAGAGCATTATAGAGGCCAACGGATTATCGCATATCATAAATGTGCTGCATACTACCGTTGAGGATGCAACAATAGCTGAGGAAGTTGATGTCATCATATCTGAGTGGATGGGCCACATGCTCTTCCAAGAGAACATGCTCCCGTCGGTCATTTCAGCCAGAGATCGTTGGCTTGCAGTTGGAGGATTAGTGCTTCCTACCTCTGCAACGTTGTATATGGCTCCTTTTTCTGATTCCCAGAGATATCACCAGAAGATTGGCTTCTGGTCTGATGTTGATGGCATAGATATGTCTGTTTTAATTCCACCGACCACGTCTGTTGTTTGTCGATTTCCATCAGTAGAGACAGTTGAGCATGACTGTCTTTTGGCAGAGCCTCATCAGGTGATAATGGTCGACATGTATTCCATTACCAGTTCTGATGTTGATCTTATCACCACATCATTTAGGTTCCATTCACGGAGGAGCGCACTACTACACGGTTTCGTGCTATGGTTCGTAGCTGATTTTTCTGATGAGGCCGTTCATCATGATGAACGGGATTCTATAGAGGTTGAGTCTGCTCCAGCACTATCTACCGCTCCTGATGCACCCTCGACACACTGGGAGCAGACTTTGTTAAACTGTCCTGATCCACTCCATGTAGAAGAAGATCAGGTGATCGAAGGAATTTTAACTATAAAAATTGACGAATCCGATCACCGACTTCTCAGAATTTGTCTGAATTATGGGAGAACAGGTTGGTAA 1374 0.4534 MENEGNNDGSENPVAITGSGIDTDGGESLQIGSEIDTNGGESEEKQIGSEIDTNYGGESQQIGSEIDTNAGESKEEQIGSEIDGGEREEVQTVSETDADFRKMFGISIPRQNIVVENEEAKADIIRRRRKDCDKGFFSNYDDVTVHRNMIQDTHRMEAYNSAVLFYKDRIEGKVIVDVGCGTGILSIFCAKAGARKVYAIEASQMALHAKSIIEANGLSHIINVLHTTVEDATIAEEVDVIISEWMGHMLFQENMLPSVISARDRWLAVGGLVLPTSATLYMAPFSDSQRYHQKIGFWSDVDGIDMSVLIPPTTSVVCRFPSVETVEHDCLLAEPHQVIMVDMYSITSSDVDLITTSFRFHSRRSALLHGFVLWFVADFSDEAVHHDERDSIEVESAPALSTAPDAPSTHWEQTLLNCPDPLHVEEDQVIEGILTIKIDESDHRLLRICLNYGRTGW* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5109 457 MobiDBLite consensus disorder prediction 52 68 - -
Tpr7g5109 457 Pfam Ribosomal protein L11 methyltransferase (PrmA) 171 251 - -
Tpr7g5109 457 Gene3D Vaccinia Virus protein VP39 129 275 IPR029063 -
Tpr7g5109 457 MobiDBLite consensus disorder prediction 1 37 - -
Tpr7g5109 457 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3 74 452 - -
Tpr7g5109 457 MobiDBLite consensus disorder prediction 69 91 - -
Tpr7g5109 457 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 140 455 IPR029063 -
Tpr7g5109 457 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 133 447 IPR025799 GO:0016274|GO:0018216
Tpr7g5109 457 CDD AdoMet_MTases 175 274 - -
Tpr7g5109 457 Gene3D - 277 456 - -
Tpr7g5109 457 MobiDBLite consensus disorder prediction 1 91 - -
Tpr7g5109 457 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 74 452 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5109 Tpr-Chr7 58700125 58710887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5109 124 432 C2H2 Transcription Factor Family AT3G12270 36.111 1.16e-56 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5109 K11437 - jre:108993292 313.538