Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5099 ATGGCGTCTGGTTACATTGCACGTTTCATCTTCTTCGTGATTTTGATTTCTTTGGCAGATTCCTCACATGTGAAGGACCTACACAAGACCTTGAACTACTCACCGGTGCTCCAAGGATGGAAAGGAGTTGGAGGCTTGCTCCACAATCTACAAAACTTGCAACATCTTGATGTCTGCTCTAACAACATAGTGGGTGTGATACCAATACCATTCCGTCTGCCTCCCAATGCCACACATATGAACATGGCTTGCTGCATCTATTTGTGCAAAAATATCCGTCAGTCATTATCAACAACGAAGAAACTAAGGCATCTGAATTTAAGTCACACTTTCTTATTTGGACCCATTGGCAATGTGTTCACTGGCTTAGATAACCTGGAAGAAATTGATGTCAGCTCTCACAACATAGTGGGTGTGATACCAATACCATACAGTCTGCTTCCCAATTCCACTCATATGAACATGGCTTGCTGCATCTATTTGAGCAAAAATATCTCCCATTCTTTATCAACAACGAAGAAACTAAGGCATCTGAATTTAAGCCACAATTTCTTGTTTGGACTCGTTGGCAATGTGTTCACTGGCTTAGATAACCTGGAAAAAATGAACATTCAACAGAATCTGTTTAGTGGTATTCTTCCAGAAAATGTCCAGACCATACCAAACTTATGGATTGGAGGGAGTAAGTTATATCCATTGGGTGACTCTCCTCTCTGGGAATTTCCTTTTGAATATGTTATAGTTGAGCACAGTAGCAGTTGCCCACACACAACTCAGGCAAATGCCAATGAAAACTTTGTGAGAAAACATGAGAAGATCCCCATGGGTCGTGGAGGAATAGCTTTTATGGTTGACGGAGGAACATTATTGGCAAAAGGATTCACCTTATTATTGGAAACAGGATTCGCCTTCTTCATTCTAATTCATTTTAATAAATTGCTGTTGAGGCTGAGGAGCTTTGGAAGCAGTCATATTACACTGGTGTCTCATCCTGTTTATGCAGCCGAAGATGATCAAGTTAGAATGTATTTGAACAAGAGATCAAGCCATACAAAGTTACTCATGCTAAAGGCTATGCAGCAAGGTCGTCGTAAAAAACGAAAGACAACCAAGGCAGAAAGTAGTGGAGGAAGAAGTGCTGAAAACACACCAGCTGTGCCAAGAAAAAAGGCAGTTTTAATTGGGGTGATGTATTACAAGTTTGGAGAAGATAGACTGTTGCATACCTTAGATGAAGTCGAAGGGATGAAAACAATTTTAATGGAAAACTTCAATTTCATAGACCAAGATATCACGATACTGTGTGACACCAACAAGTATACGCATCCAACAAAAGTGGCAATTCAAAGACAACTAACATTGTTAGTTGAAGAAGCTAATGCACAAGATATACTTTTTGTGTATATAGCGGGACATTCCATTGAGTTTGAAGTTGATAAATTTGGAATTTGGACTTCCGATTCTAAATTTATAACGGATCATTTTTTGTCTACAAAATTCATGCCGAAAGTGCCGCTGGAAGCGACACTAACAGTGATGATCAACACTTGCTTTGCCGGGAATTTTATGAAAGGTGCAATACAAAGCGTAAACGTGGTAGTCTTTCCACTTAGTGAATCTCATGAAGTCACCTTCGATGGACATATATATTATGAAGTTCTCAGTGGAATACTCGAAGGAGAAACTTCAACCAACATCAAGGTTTATAGACAACTTAAGAAGGCTGTGTGTGCTTTAGTTATAATGGGATATGATGGTCTTCCAGTCTACTGCCCAGAAAGAACTACTAGAACCAGAAACATCATATACCAACCAATTAACGGTGTCACTCACAGATATTCCCACTCCACGTAA 1854 0.3964 MASGYIARFIFFVILISLADSSHVKDLHKTLNYSPVLQGWKGVGGLLHNLQNLQHLDVCSNNIVGVIPIPFRLPPNATHMNMACCIYLCKNIRQSLSTTKKLRHLNLSHTFLFGPIGNVFTGLDNLEEIDVSSHNIVGVIPIPYSLLPNSTHMNMACCIYLSKNISHSLSTTKKLRHLNLSHNFLFGLVGNVFTGLDNLEKMNIQQNLFSGILPENVQTIPNLWIGGSKLYPLGDSPLWEFPFEYVIVEHSSSCPHTTQANANENFVRKHEKIPMGRGGIAFMVDGGTLLAKGFTLLLETGFAFFILIHFNKLLLRLRSFGSSHITLVSHPVYAAEDDQVRMYLNKRSSHTKLLMLKAMQQGRRKKRKTTKAESSGGRSAENTPAVPRKKAVLIGVMYYKFGEDRLLHTLDEVEGMKTILMENFNFIDQDITILCDTNKYTHPTKVAIQRQLTLLVEEANAQDILFVYIAGHSIEFEVDKFGIWTSDSKFITDHFLSTKFMPKVPLEATLTVMINTCFAGNFMKGAIQSVNVVVFPLSESHEVTFDGHIYYEVLSGILEGETSTNIKVYRQLKKAVCALVIMGYDGLPVYCPERTTRTRNIIYQPINGVTHRYSHST* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5099 617 Gene3D - 333 575 - -
Tpr7g5099 617 PANTHER LEUCINE RICH REPEAT KINASE 2 43 141 - -
Tpr7g5099 617 PANTHER LEUCINE RICH REPEAT KINASE 2 199 302 - -
Tpr7g5099 617 PANTHER LEUCINE RICH REPEAT KINASE 2 123 207 - -
Tpr7g5099 617 Pfam Caspase domain 388 529 - -
Tpr7g5099 617 Gene3D Ribonuclease Inhibitor 16 138 IPR032675 -
Tpr7g5099 617 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 199 302 - -
Tpr7g5099 617 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 123 207 - -
Tpr7g5099 617 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 43 141 - -
Tpr7g5099 617 Gene3D Ribonuclease Inhibitor 139 230 IPR032675 -
Tpr7g5099 617 SUPERFAMILY RNI-like 47 223 - -
Tpr7g5099 617 MobiDBLite consensus disorder prediction 359 384 - -
Tpr7g5099 617 Pfam Leucine Rich Repeat 52 76 IPR001611 GO:0005515
Tpr7g5099 617 Pfam Leucine Rich Repeat 174 194 IPR001611 GO:0005515
Tpr7g5099 617 Pfam Leucine Rich Repeat 101 120 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5099 Tpr-Chr7 58509273 58514267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5099 10 272 Strubbelig Receptor Gene Family AT5G06820 28.205 5.63e-22 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5099 - - cam:101498175 234.572