Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5096 ATGTTGTTTGTTTTGTCTTCCACCTCACTGATCATGAAACTTGACACTGATTTTCTTTTAAAACCCATTTTCCTACATGGGTTATCTAGCATACTTCATGTACTATTGCTTGTGGCTCTTTTAGTCTCATGGGTTTGGAAAAAAACTACAACTTGTGTTGTGATCAATAATGATTTTAAGGAGACACCCAACAACACTTGGTTTAAAGTGACAAAGTTTTCTTGTATTGGTTTTTCTTCTTTCAATTTTCTTTTGTTTATCTTTAATTACTTTTATTGGTCAGAAGAAAATGTTGTTACCCTTTTTGATTTAGCTCTCAAAACAGTTACTTGGTGTGTTGTTTTTGTATGTTTACATAAAGGATTCTCCTTTTTCTTCAGTTCAGGTCAAAGAAAAAGAACAACGTTTTCATTCTTCTTTAGAGCTTGGTGTGTTTTTTATCTCTTTGTTTCTTGTTATTGCTTTGTGATCGACATTGTTGTTTTGTATGAAAATCATATTGAGTTAAGGATTCAATGCATGGTTTCTGTTGTGGTATCCTTTTGTGTTGGTTTGTTCTTCTGTTATGTGGGATATTGTGTGAAAAATGAGACTGAAGAAGAAGGTGATACAACTCTTCAAGAACCTCTTTTGAATGGTAATGAGACTAAAGGGAGTGACACTGTTACTCCCTTTTCAAATGCTACAATTCTAAGCCTTCTCACCTTCACTTGGGTCGGTCCACTCATTGCATTTGGCAATAAGAAGACCATTGACCTTGAAGATGTTCCTCAGCTAGATAGTGGTTATAGTGTGGTTGGAGCTTTTCCAACTTTCAGAGACAAAGTTGAAGCTGATTGTGGTGCAATCAATAGATTAACAACAATGAAGTTGGTTAAGTCATTGATAATCTCAGGGTGGAAAGAGATTCTTATCACTGCTTTTCTTGCATTGGCAGACACTTGTGCTTCTTATGTTGGTCCTTATCTTATTGAGTCTTTTGTTCAATACCTTGATGGAAAAAGGCTATATGAGAATCAAGGCTATGTTATGGTTTCTGCTTTTATATTTTCAAAGCTCGTAGAATGCTTCGCAAAAAGACATTGGTTCTTTAGGTTGAAGCTACTCGGAATTCGAATCCGAGCACTGCTTGTAACTATGATATATGATAAAGCCTTAACACTTTCATGTCAATCAAGGCAGTGTCACACTTCTGGAGAAATAATCAATTTCATTACCGTTGATGTCGAAAGAGTTAGTAATTTCAGTTGGTACATGCATGAGTTGTGGATATTAGCTTTGAAAGTTACATTGGCATTGTTGATTTTGTATAAAAACCTTGGGCTTGCTTCAGTCGCTGCTTTTTTTACAACCATCATTGTTATGTTGGCAAATATTCCATTTGGATCATTACAAGAGAAGTTTCAAAATAAGTTGATGGAGTCAAAGGATACTAGAATGAAGAGCACATCTGAAACTTTAAGGAACATGAGGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCGAAAATAATTGAGCTCAGGAATGCCGAACAAGGCTGGTTAAAAAAAATTCTTTTTACCAAAGCCATCGCTACATTTTTCTTTGAGAGTTCAGATACGCTTGTATGTGTGGTTACATTTGGTACTTGTATGCTCATAGGGATCCCACTTGAATCAGGGAAGATTCTGTCAGCACTTGCAACACTCGGGATTCTTACTGGGCCTATTTATAATCTTCCGGATGTAATTTCAGCGATAGCACAAACTAAAGTTTCCCTTGATAGGATCACGTCCTTCCTTCGTCTTGATGACTTGCAGTTTGATGTTGTCGAAAAGCTTCCTGTAGGAAGTTCTGATACTTCAATTGAAATGGTTGATGGGAATTTTTCTTGGGATTTATCTTCACCTACTCCAACTTTGCAGAACATAAACCTCAAAGTTTTTCATGGCATGAAGGTTGCTGTTTGCGGTACTGTTGGATCGGGCAAGTCTACTTTACTTTCATGTGTATTGGGAGAAGTACCAAAGATATCAGGTATCCTTAAAGTTTGTGGGAAAAAGGCCTATGTTGCTCAATCACCATGGATTCAAAGTGGCAAGATAGAGGATAATATATTGTTTGGTGAACACATGGTTAGGGAAAGGTATGAGAAGGTACTTGACGCATGTTCCCTGAAGAAAGATCTCGAAATCCTGTCATTTGGTGATCAGACGGTTATAGGCGAGCGAGGAATTAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGTGCTCTTTATCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCACCTTTTTAAGGAATGCTTGCTGGGTGCTTTAAGTTCAAAAACAGTTGTTTATGTTACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTTATATTGGTCATGAAAGATGGAAAAATTACTCAAAGTGGAAAGTATGTCGAGCTTGTTAACATTGCAACCGATTTTATGGAACTTATTGGGGCACACAGAGAAGCTTTGTCTACACTTGAATCATTTGATGGAGGAAAAACATCTAATGAAAAAAGTACATTAGAACAAGAAGTAAATATCTCTGATATTCGTGAAGAGGCAAACAAAGAAGTGAAAAATGGTAAAGCAGATGATAAAGGTGAACCGAAAGGCCAACTTGTTAAAGAAGAAGAAAGGGAGAAAGGTAAAGTTGGGTTTTCAGTCTATTGGAAGTATATCACAACTGCATATGGAGGAGTTTTCGTACCGTTCATATTATTAGCTCAGATTCTTTACAAAACTCTTCTAATTGGAAGCGACTATTGGATTATGTTGAAAACTCCCATATCAGCAGATGTGAAGCCACCTGTTGAAGAAACGACTCTTATTGAAGTCTATGTTGGTTTGGCCATAGGAAGTTCTTTATGCGCTCTTGTTATAGAATTGTTACTTGTTATAGTTGGTTATAAGACAGCTACTATACTCTTCAATAAAATGCACTTGTGCATCTTTCGCGCCCCCATGTCATTTTTCGATTCTACTCCAAGTGGAAGAATCCTTAATAGAGCTTCTACTGACCAAAGTTCAGTGGATACAACCATTCCTTATCGAATTGGCTCATTTTCCTTTATTGTGATCTCGCTTCTGGGAACTATAGCAGTGATATCTGAGGTTGCATGGCAAGTTTTCATTGTCTTTGTACCCGTGATGGCAGTCAGCATTTGGTATCAGCAATATTATTTACCATCAGCCCGTGAACTGTCACGTTTAATTGGAATATGCAGAGCCCCGATGATTCAATACTTTGAGGAAACAATTTCAGATATTTTATCTTCCATCATATTTGCCTTTTCCTTGATATTCTTGATATCGATTCCACCTGGAATCATAAATCCAAGCATTGCTGGTCTAGCTGTTACTTATGGTCTAACTTTAAACATGGTACAATCTGTGGCGATATGGAATCTTGGTAACTTGGAGAGCAATATTATATCGGTAGAAAGGATCCTTCAATATACAACCATTCTTAGTGAGCCTCCCCTTGTTTTAGAAGAAGAAAATAGACCAGATCCTTCTTGGCCTGCATACGGCAAAGTTGATCTACGGAACTTGCAGGTACGATATGCTGCTCATCTTCCGCTTGTGTTGCGTGGCCTGACATGCACATTTCATGGAGGATTGAAAACTGGCATTGTTGGTAGAACAGGTAGCGGCAAATCAACTCTTATACAAACACTTTTCCGACTCATTGAACCTACTGCTGGGGAAGTTATCATTGACAGCATCAACATCTCTTCAATCGGACTGCATGATTTGAGGTCTCGACTAAGCATTATTCCGCAAGATCCAACAATGTTTGAGGGGACGGTGAGAAGTAATTTGGACCCCCTTGAAGAGTACACTGATGAACAAATATGGGAGGCATTGGATAAGTGTCAACTCGGAGATGAAGTTAGAAAGAAAGGAAAGCTTGACTCTTCAGTTAGTGAAAATGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTTTGCCTAGGTAGGGTTCTATTAAAGAAGAACAAGATTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACAGCTACAGATAATTTGATTCAACAAACTCTTAGGGAACATTTCACAGACTCTACTGTCATTACCATTGCACACCGAATAACTTCTGTTCTTGACAGTGATATGGTTCTACTTCTTAGTCAAGGACTTATTGAGGAGTATGACTCCCCAACCACATTGCTCGAGGATAAGTCATCATCTTTTGCTAAGCTTGTTGCAGAGTATACCATGAGATCCAACTCAAAATTTAGAGAAATTTGTTGA 4350 0.3791 MLFVLSSTSLIMKLDTDFLLKPIFLHGLSSILHVLLLVALLVSWVWKKTTTCVVINNDFKETPNNTWFKVTKFSCIGFSSFNFLLFIFNYFYWSEENVVTLFDLALKTVTWCVVFVCLHKGFSFFFSSGQRKRTTFSFFFRAWCVFYLFVSCYCFVIDIVVLYENHIELRIQCMVSVVVSFCVGLFFCYVGYCVKNETEEEGDTTLQEPLLNGNETKGSDTVTPFSNATILSLLTFTWVGPLIAFGNKKTIDLEDVPQLDSGYSVVGAFPTFRDKVEADCGAINRLTTMKLVKSLIISGWKEILITAFLALADTCASYVGPYLIESFVQYLDGKRLYENQGYVMVSAFIFSKLVECFAKRHWFFRLKLLGIRIRALLVTMIYDKALTLSCQSRQCHTSGEIINFITVDVERVSNFSWYMHELWILALKVTLALLILYKNLGLASVAAFFTTIIVMLANIPFGSLQEKFQNKLMESKDTRMKSTSETLRNMRILKLQGWEMKFLSKIIELRNAEQGWLKKILFTKAIATFFFESSDTLVCVVTFGTCMLIGIPLESGKILSALATLGILTGPIYNLPDVISAIAQTKVSLDRITSFLRLDDLQFDVVEKLPVGSSDTSIEMVDGNFSWDLSSPTPTLQNINLKVFHGMKVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGKKAYVAQSPWIQSGKIEDNILFGEHMVRERYEKVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGALSSKTVVYVTHQVEFLPAADLILVMKDGKITQSGKYVELVNIATDFMELIGAHREALSTLESFDGGKTSNEKSTLEQEVNISDIREEANKEVKNGKADDKGEPKGQLVKEEEREKGKVGFSVYWKYITTAYGGVFVPFILLAQILYKTLLIGSDYWIMLKTPISADVKPPVEETTLIEVYVGLAIGSSLCALVIELLLVIVGYKTATILFNKMHLCIFRAPMSFFDSTPSGRILNRASTDQSSVDTTIPYRIGSFSFIVISLLGTIAVISEVAWQVFIVFVPVMAVSIWYQQYYLPSARELSRLIGICRAPMIQYFEETISDILSSIIFAFSLIFLISIPPGIINPSIAGLAVTYGLTLNMVQSVAIWNLGNLESNIISVERILQYTTILSEPPLVLEEENRPDPSWPAYGKVDLRNLQVRYAAHLPLVLRGLTCTFHGGLKTGIVGRTGSGKSTLIQTLFRLIEPTAGEVIIDSINISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRKKGKLDSSVSENGENWSMGQRQLVCLGRVLLKKNKILVLDEATASVDTATDNLIQQTLREHFTDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDSPTTLLEDKSSSFAKLVAEYTMRSNSKFREIC* 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5096 1449 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 584 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g5096 1449 MobiDBLite consensus disorder prediction 879 899 - -
Tpr7g5096 1449 CDD ABCC_MRP_domain1 618 818 - -
Tpr7g5096 1449 CDD ABC_6TM_ABCC_D1 305 592 IPR044746 GO:0140359
Tpr7g5096 1449 Pfam ABC transporter transmembrane region 963 1112 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g5096 1449 Pfam ABC transporter transmembrane region 304 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g5096 1449 ProSitePatterns ABC transporters family signature. 743 757 IPR017871 GO:0005524
Tpr7g5096 1449 Gene3D - 1184 1437 IPR027417 -
Tpr7g5096 1449 CDD ABC_6TM_ABCC_D2 921 1176 IPR044726 GO:0140359
Tpr7g5096 1449 SMART AAA_5 645 818 IPR003593 -
Tpr7g5096 1449 SMART AAA_5 1228 1419 IPR003593 -
Tpr7g5096 1449 CDD ABCC_MRP_domain2 1200 1419 - -
Tpr7g5096 1449 SUPERFAMILY ABC transporter transmembrane region 958 1183 IPR036640 GO:0005524|GO:0016021
Tpr7g5096 1449 SUPERFAMILY ABC transporter transmembrane region 295 597 IPR036640 GO:0005524|GO:0016021
Tpr7g5096 1449 Gene3D ABC transporter type 1, transmembrane domain 857 1122 IPR036640 GO:0005524|GO:0016021
Tpr7g5096 1449 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 968 1110 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr7g5096 1449 Gene3D ABC transporter type 1, transmembrane domain 283 600 IPR036640 GO:0005524|GO:0016021
Tpr7g5096 1449 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 107 1110 - -
Tpr7g5096 1449 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1111 1446 - -
Tpr7g5096 1449 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 107 1110 - -
Tpr7g5096 1449 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1111 1446 - -
Tpr7g5096 1449 Gene3D - 605 856 IPR027417 -
Tpr7g5096 1449 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1204 1435 IPR003439 GO:0005524
Tpr7g5096 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1194 1430 IPR027417 -
Tpr7g5096 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 614 839 IPR027417 -
Tpr7g5096 1449 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 618 841 IPR003439 GO:0005524
Tpr7g5096 1449 Pfam ABC transporter 1220 1366 IPR003439 GO:0005524
Tpr7g5096 1449 Pfam ABC transporter 636 770 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5096 Tpr-Chr7 58480812 58487027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5096 618 834 Calmodulin-binding Proteins AT2G36910 31.330 3.28e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5096 - K05666 gmx:100777836 2118.2