Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5083 ATGGGCGCGCGCTCTAATTCGATTGTGCGCGCACCTGTAGCATTTAATATTAATAATAATAATAATAATAATAATGTCAAGGCCTTGGTTGTTTTTGTGGTATTATTACTACTTTCATGCACAAGCATGTCAATGTCACCTTCGGATGCTGAGGCTCTAATAAAGTTCAAGGGTTCATTAACAAATGCGGTGTCCCTCAGCAGTTGGGATCCATCCATAAACCCAAAACCACCTTGCACCGGAAACATTTCCAATTGGGTGGGCTTGTTTTGCCTGAATGGGAGGGTGCTGGGGTTACGCCTTGAGAGCATGGGGTTAACCGGAAATATGGAATTGGAATCTCTTTCTTCAATGCCGATGTTGAGGATGGTTAGCCTGATGAACAATACCTTTGTGGGTCCCTTGCCCAACATCAAGATGTTGCCCCATTTGAGGTCTATCTACTTGTCCTATAATCATTTCTCAGGACAGATACCTGACGATGCATTTACGGGTATGCCTAGGTTGAGGAAAGTGTATTTGTCCAATAACGAGTTCACCGGTAAAATTCCATCCTCTCTCGCTATCTTGCCTACTCTCCTCGTCCTCAGGCTTGACGCAAACAAGTTTCAAGGTGAGATCCCCAATTTTCATCACAAGAATAATTTGAAGATTATCAACTTCTCTAACAATAACTTAGAAGGTCCCATCCCACCTAATCTAAGAACCTTCGACGCCTCCTCTTTTAAAGGAAACACACTTCTATGTGGGCCTCCTTTGATGAATAGTTGTGAATTAGCAAATCCCAAAATGCTTGTTATGAAAACTTTACTTATTGTGATGATGATAGCCTTTATAGTAGCCATTGTGGTTTCAATAGTGGTCATCTCCCGTTTGAGGTCCCAAAAGAAGCAATTAAACGAAGAACATTATTCTACAACGTCAAAATTTCATACACAAGCATCTAGCAAATATGTTAAGCCTCCTGCAGTTTATGTGAAAACTAAAAGTTTGGCCGAACACTATGATCCCAGAAGTCCTAAGCCAGATCAGTACAGTCATGGTCATTCCAAAAAGGAAAAGGGCGAACAAGGAAAACTTATATTTCTCAGGAAGGATGGACTCAAATTTGATTTACAGGATTTACTAAAGGCCTCCGCTGAAATTCTAGGAAGCGCGTCATTCGGTTCATCCTACAAAGCCGTGATCTTGGATGGCCAAGCCGTGGTTGTCAAGAGGTACAAGCAAATGAACAATGTGCAAAGAGAAGAGTTCCATGAGCATATGAGAAGGCTAGGAAACCTCAGTCATCCCAATGTTCTACCTCTCATTTCTTATTATTATAGAAGAGAAGAAAAACTTTTGATCTCTTCCTTTGTTCACAATGGTTGCTTGGCCAGTCATCTTCATGGTAACCACAACTACCAGAAGCCAGGACTTGATTGGGCAACCCGTTTGAAAATCGTGAAAGGTGTAGCGAGGGGTTTGTCATATCTATATAGTGCACTCCCAAGCGTGATTGTGCCTCATGGTCATCTAAAATCTTCCAATGTACTTTTAGATGAATCCTTTGAACCTCTGCTCACTGATTATGCGCTCAGTCCTTTGATCAATCTTGACCACGCACAACAAATCATCATGCCTTACAAATCCCCGGAGTATGCTCAACTTGGGCGCATTACAAAGAAAACTGATGTGTGGAGTTTTGGGATTCTAATATTGGAGATTCTTACGGGTAAATTCCCAGAGAACTATATTACAGCAAGGCATAATAGTGATTCTGACTTAGCTAGTTGGGTAAATATGATGATTACCGAGAAACGCACAAGTGATGTATTTGACGTAGAGATGGGAGGAGTAGGTACTAGTAAAGCTGAATTGCTCAAACTCTTAAAGATTGGACTCGGTTGTTGTGAGGAGAATGTAGAAAGAAGGTTGGACATCAAAGAGGCTTTAGAGCAGATTGAAGACTTGAATGAGGGTCAAACAAGTACTACTGATCATACTGTTGGAGAATACTCTTCCTCCCTTACCACCACTACTACTGAAAGGGATGCTTACAGAGCTGTGTGA 2052 0.4147 MGARSNSIVRAPVAFNINNNNNNNNVKALVVFVVLLLLSCTSMSMSPSDAEALIKFKGSLTNAVSLSSWDPSINPKPPCTGNISNWVGLFCLNGRVLGLRLESMGLTGNMELESLSSMPMLRMVSLMNNTFVGPLPNIKMLPHLRSIYLSYNHFSGQIPDDAFTGMPRLRKVYLSNNEFTGKIPSSLAILPTLLVLRLDANKFQGEIPNFHHKNNLKIINFSNNNLEGPIPPNLRTFDASSFKGNTLLCGPPLMNSCELANPKMLVMKTLLIVMMIAFIVAIVVSIVVISRLRSQKKQLNEEHYSTTSKFHTQASSKYVKPPAVYVKTKSLAEHYDPRSPKPDQYSHGHSKKEKGEQGKLIFLRKDGLKFDLQDLLKASAEILGSASFGSSYKAVILDGQAVVVKRYKQMNNVQREEFHEHMRRLGNLSHPNVLPLISYYYRREEKLLISSFVHNGCLASHLHGNHNYQKPGLDWATRLKIVKGVARGLSYLYSALPSVIVPHGHLKSSNVLLDESFEPLLTDYALSPLINLDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYITARHNSDSDLASWVNMMITEKRTSDVFDVEMGGVGTSKAELLKLLKIGLGCCEENVERRLDIKEALEQIEDLNEGQTSTTDHTVGEYSSSLTTTTTERDAYRAV* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5083 683 Gene3D Phosphorylase Kinase; domain 1 344 452 - -
Tpr7g5083 683 MobiDBLite consensus disorder prediction 335 354 - -
Tpr7g5083 683 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 25 661 - -
Tpr7g5083 683 ProSiteProfiles Protein kinase domain profile. 377 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g5083 683 Gene3D Ribonuclease Inhibitor 212 257 IPR032675 -
Tpr7g5083 683 Pfam Protein tyrosine and serine/threonine kinase 381 580 IPR001245 GO:0004672|GO:0006468
Tpr7g5083 683 Gene3D Transferase(Phosphotransferase) domain 1 453 675 - -
Tpr7g5083 683 SUPERFAMILY L domain-like 76 242 - -
Tpr7g5083 683 Pfam Leucine rich repeat N-terminal domain 47 91 IPR013210 -
Tpr7g5083 683 Gene3D Ribonuclease Inhibitor 46 211 IPR032675 -
Tpr7g5083 683 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 25 661 - -
Tpr7g5083 683 SUPERFAMILY Protein kinase-like (PK-like) 381 650 IPR011009 -
Tpr7g5083 683 MobiDBLite consensus disorder prediction 652 683 - -
Tpr7g5083 683 Pfam Leucine rich repeat 142 203 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5083 Tpr-Chr7 58338160 58340306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5083 25 673 Receptor kinase-like Gene Family AT5G35390 47.006 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr7g5083 PK_Tyr_Ser-Thr 3.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5083 - - pvu:PHAVU_005G185800g 919.072