Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5077 ATGGCAGCAACAGAACAAAAACAAGAAGAAATAATATTCAGGTCTAAACTTCCAGACATATACATCCCAAAACACCTACCACTTCATTCTTATTGCTTTGAAAATCTGTCCCAATTTGGTTCACGTCCATGTCTCATCAATGCACCCACCGGAAAAGTGTACACCTACGACGACGTGGAAGTCACCTCTCGTAAAGTTGCCTCTGGTCTCAACAGATTGGGAATCCAACAGGGTGATGTCATCATGATCCTCCTCCCCAATTCCCCTGAATTTGTCTTCTCCTTTCTGGCCGCTTCTTATCTCGGTGCCATAGCCACAGCAGCCAATCCTTTCTTCATGGCTGCGGAGATTGGAAAGCAAGCAAAAGCCTCCAAAGCCAAGTTGATCATAACACAGGCATGTTACTACCACAAAGTCAAGGAAATATTGTTGTCATTGGACAATAAGAAGAACAAGTTGGTGCTCATAGACTCTCTCCCTCCCTCTACAACAACATCTTCAGATGATGATGATGATGATGATCATGTTCATTTCTCAACACTGATCGATGCTGGTGATGAGAAGGAGGAATTACCACCGGAGGATGTGAAGATTAACCCTGACGATGTGGTGGCGCTTCCATATTCATCAGGGACAACGGGTCTACCAAAAGGGGTGATGTTAACACACAAGGGATTAGTGAGCAGCATAGCGCAGCAGGTAGATGGAGAGAATCCAAATCTATATTACAGCAGTGAAGATGTGATACTGTGTGTACTTCCTCTGTTTCACATTTACTCTTTAAACTCTGTTTTGCTATGTGGATTAAGAGCCAAGGCTACTATTCTTTTGATGCCTAAATTTGACATAAATGCTTTCTTGAGTCTTGTGAATAAACATGGAGTTACAGTTGCACCGGTAGTACCTCCGATTGTTTTGGCGATTGCAAAGTCACCGGATCTTAACAAATATGATCTGTCTTCAATAAGGATATTGAAATCAGGAGGTGCTCCACTTGGGAAAGAACTTGAACACACTGTTAGAACCAAATTTCCCAAAGCAATACTTGGACAGGGATACGGAATGACTGAGGCAGGGCCAGTGTTAACGATGAGCTTAGCATTTGCAAAAGAAGCAGTGACTGTGAAACCAGGAGCATGTGGAACAGTTGTAAGAAATGCAGAGATGAAGATTGTGGATCCTGAAACTGGTAATTCATTACCTAGAAACCAATCTGGTGAAATATGCATAAGAGGAGACCAGATCATGAAAGGTTATCTAAATGATGTGGAGGCAACAGAGAGAACAATAGACAAAGAAGGTTGGTTGCATACAGGTGATATTGGGTATATTGACGATGACGATGAGTTATTCATTGTTGATAGATTGAAGGAATTGATCAAATACAAAGGATTTCAAGTTGCTCCAGCTGAACTTGAAGCCCTTCTTCTTTCACATCCCAAAATCTCTGATGCTGCTGTTGTCCCAATGAAGGATGAGGCTGCTGGAGAGGTACCTGTTGCATTTGTGGTGAGATCAAATGGTCACACTGACTTAACCGAGGATGAAATTAAGCAATTTATCTCCAAACAGGTGGTGTTTTACAAAAGAATAAATCGAGTATTCTTCATTGATGCAATTCCCAAGTCACCGTCAGGCAAAATTTTGCGTAAGGATCTCAGAGCAAAGTTAGCAGCAGAAGCTGTTTCAAATTGA 1695 0.4189 MAATEQKQEEIIFRSKLPDIYIPKHLPLHSYCFENLSQFGSRPCLINAPTGKVYTYDDVEVTSRKVASGLNRLGIQQGDVIMILLPNSPEFVFSFLAASYLGAIATAANPFFMAAEIGKQAKASKAKLIITQACYYHKVKEILLSLDNKKNKLVLIDSLPPSTTTSSDDDDDDDHVHFSTLIDAGDEKEELPPEDVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVSSIAQQVDGENPNLYYSSEDVILCVLPLFHIYSLNSVLLCGLRAKATILLMPKFDINAFLSLVNKHGVTVAPVVPPIVLAIAKSPDLNKYDLSSIRILKSGGAPLGKELEHTVRTKFPKAILGQGYGMTEAGPVLTMSLAFAKEAVTVKPGACGTVVRNAEMKIVDPETGNSLPRNQSGEICIRGDQIMKGYLNDVEATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPKISDAAVVPMKDEAAGEVPVAFVVRSNGHTDLTEDEIKQFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAEAVSN* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5077 564 Gene3D - 10 457 IPR042099 -
Tpr7g5077 564 ProSitePatterns Putative AMP-binding domain signature. 206 217 IPR020845 -
Tpr7g5077 564 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 559 - -
Tpr7g5077 564 Pfam AMP-binding enzyme C-terminal domain 471 547 IPR025110 -
Tpr7g5077 564 Pfam AMP-binding enzyme 34 462 IPR000873 -
Tpr7g5077 564 SUPERFAMILY Acetyl-CoA synthetase-like 12 560 - -
Tpr7g5077 564 Gene3D - 458 561 IPR045851 -
Tpr7g5077 564 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 7 559 - -
Tpr7g5077 564 CDD 4CL 22 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5077 Tpr-Chr7 58285296 58288950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5077 4 525 Monolignol Biosynthesis Gene Families AT1G51680 66.920 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5077 K01904 - gmx:547944 865.144