Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5076 ATGGAGTACTACTCAAATATAATAATTAATAGTAATGGTGCGGGGTTAGTGTTGATGATGTTTTTACTTGAAGTTGCAGTGATCATGTGTTCCAAAGGTAGTAGTAGTAGTATGATGATAATCGTATCTAAGGATGGAAGTGGAGATTATAAAAGCGTGGGTGAAGCTATCAGCAATGCTCCTGATTATAGTAAGCAAACTTACAATATTCACATTTTGGGAGGCATTTATGAAGAGTACATTCTGATTCCACCAAGTAAGACTAATATTAAGCTCCTAGGTCATGGTTCAACCCACACGATAATACTGGGACGCCAAAATGGTTCCACCATAGACATCCGTGGAAATGGGTTCATGGCACAGAACATTGGATTTGTGAACTCAGCGGGTCTAGATGCAAGCGCTGCAGTGGCAGTTCGTAACGAGGCAACCAATAGCATTTTCTTTCAATGCTCCATCCAAGGATTCCAAGACACCTTATGGGCAGTTTCAGGCAGACAATTCTACAAGAACTGTGAAATCTACGGTACCGTGGATTTCATCTACGGCAATGCAGCCGCTGTATTTCAAGACTGCATGATTTACGCACGCTATAGACAGTTTGTGACATTCACCGCTCAATCACGGGAGAGTCCAAACGAGAAGACAGGTTTCACATTCCAACGTTGTAAATTCAGCATGTCACCTGAGGATGAGAACAAAAAGTCAGAGGTGGTACGTGCCACGTTAGGACGTCCTTGGAGAGCATATTCCACTGTGGCTATACTGCAGTGTTACATAGATTCCATGGTGGATCCTGGAGGTTGGGAACAGATGCCAGGACAGCCCATTGATAAGGTTACTTATGTGGAGTATAAGAATGTTGGTCCTGGTTCTAACACTGATGGTAGAGTGAATTGGCCTGGTGTTAGAGTTCTTGGCAATCCAAATGAAGCACTCCCTTTCACAGCTTCCTATCTATTGGATGCTCACTCTTGGATTCCATCTACAGGTGTTCCATATGATACTGGACTTTAA 1017 0.4297 MEYYSNIIINSNGAGLVLMMFLLEVAVIMCSKGSSSSMMIIVSKDGSGDYKSVGEAISNAPDYSKQTYNIHILGGIYEEYILIPPSKTNIKLLGHGSTHTIILGRQNGSTIDIRGNGFMAQNIGFVNSAGLDASAAVAVRNEATNSIFFQCSIQGFQDTLWAVSGRQFYKNCEIYGTVDFIYGNAAAVFQDCMIYARYRQFVTFTAQSRESPNEKTGFTFQRCKFSMSPEDENKKSEVVRATLGRPWRAYSTVAILQCYIDSMVDPGGWEQMPGQPIDKVTYVEYKNVGPGSNTDGRVNWPGVRVLGNPNEALPFTASYLLDAHSWIPSTGVPYDTGL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5076 338 Pfam Pectinesterase 40 322 IPR000070 GO:0030599|GO:0042545
Tpr7g5076 338 PANTHER PECTINESTERASE 24 337 - -
Tpr7g5076 338 PANTHER PECTINESTERASE 24 337 - -
Tpr7g5076 338 Gene3D - 34 338 IPR012334 -
Tpr7g5076 338 SUPERFAMILY Pectin lyase-like 34 336 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5076 Tpr-Chr7 58281022 58284511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5076 41 338 Carbohydrate Esterase AT3G05620 42.222 5.62e-81 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5076 K01051 - gmx:102665195 442.58