Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5069 ATGTTTCAAGCATTGCGGACAATGGTGCAATCCAATCCAGAAATTCTCCAGCCTGTACTTCAAGAGCTCGGAAAGCAAAATCCCGGTCTCTTGAGACTAATTGATGAGAATCATTCTGAGTTTCTTCAGTTGATAAATGAGCCCATGGATGGTTCTGATGGTTACCAAACCTCCACCATGGCAGATCTTAAAGAGCGACTGCTCCCGCTGAAACCTGCATCAGCTATTAACTTAAGAGAGTCCGTCGTCAACCGACCAACTGCCTCTGGAAGACATGCTTTTCAAGGAGTCGATGTTGTCGAGGTCAAGAAGCGTGGCCAAGGTCTTAAATCCTGGATTCGTGTTGACACATCTGGAAATTCTCAGGTCATTGAGGTAGACAAGTTTACTATGATGCGTCGTTGTGATCTTCCTGCCCGTGATCTTCGCCTACTTGATCCTGTCTTTGTCTATCCATCAACAATCCTTGGTAGGGAGAAGGCTATTGTTGTAAATCTGGAGCAGATACGCTGCATTATTACAGCAGATGAGGTTCTTCTGTTGAATTCCCTTGATAAATATGTATTGCAATATGTGATTGATCTTCAACGAAGGTTGACAACAACTGGGGGAGGCGAGGTGGGTGATGTAGGCGAGGTCTGGCAATCAGACCATTCTGAAATGAACCAAAGGAGAGGCAGTAGGAATTTTGAAAATTTATACAGCAACACTTCCCCTGATTACTTACCTTTTGAATTCAGGGCTCTTGAAGTTGCCCTCGAGGCGGCGTGCACATTTCTTGACACCCAGGCAGCAGAGTTAGAAATTGAGGCTTATCCGTTGCTGGATGAACTGACATCGAAGATTAGTACTCTAAATTTGGAACGCGTTCGTCGGTTGAAAAGCAGACTTGTTGCCCTGACTAGGAGGGTTCAGAAGGTTAGAGACGAAATAGAGCAGCTTATGGATGATGACGGTGATATGGCTGAAATGTACCTTACGGAGAAGAAAAGACGGATGGAATTATCATTTTATGGAGATCAGTCTATGCTTGGATATAGATCAGTTGACGGTGCGTCTATCTCTGCTCCAGTCACTCCTGTTTCATCACCACCTGATTCTAGAAGGCTTGAGAAGAGCTTGAGCATGGCTAGGAGTCGACATGAGAGCATGAGGAGTAGCGAAAGTAATACAGAAAATATAGAAGAGCTTGAGATGTTGTTAGAAGCATACTTTGTTGTCATTGACAGCACTCTAAACAAGTTGACTTCGTTAAAAGAATACATAGATGACACGGAAGATTTCATCAACATTCAACTGGATAATGTTCGGAATCAGCTTATCCAGTTTGAGCTTTTGCTCACAACTGCAACATTTGTGGTTGCAATATTTGGAGTGGTGGCAGGAGTATTTGGGATGAACTTTGAAATTCCATTCTTTGATGTCCCATCTGCATTCCAGTGGGTCCTTATAATAACAGGAGTTTGTGGAGTGTGTATATTTTCTGCATTTGTATGGTTCTTCAAGTACAGAAGACTCATGCCCCTATAA 1530 0.4327 MFQALRTMVQSNPEILQPVLQELGKQNPGLLRLIDENHSEFLQLINEPMDGSDGYQTSTMADLKERLLPLKPASAINLRESVVNRPTASGRHAFQGVDVVEVKKRGQGLKSWIRVDTSGNSQVIEVDKFTMMRRCDLPARDLRLLDPVFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDKYVLQYVIDLQRRLTTTGGGEVGDVGEVWQSDHSEMNQRRGSRNFENLYSNTSPDYLPFEFRALEVALEAACTFLDTQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGDQSMLGYRSVDGASISAPVTPVSSPPDSRRLEKSLSMARSRHESMRSSESNTENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFEIPFFDVPSAFQWVLIITGVCGVCIFSAFVWFFKYRRLMPL* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5069 509 Gene3D - 1 50 IPR036353 GO:0003684|GO:0006289|GO:0043161
Tpr7g5069 509 Coils Coil 290 317 - -
Tpr7g5069 509 Pfam CorA-like Mg2+ transporter protein 384 501 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tpr7g5069 509 CDD Mrs2_Mfm1p-like 112 506 IPR039204 -
Tpr7g5069 509 Gene3D Magnesium transport protein CorA, transmembrane region 447 507 - -
Tpr7g5069 509 SUPERFAMILY XPC-binding domain 1 54 IPR036353 GO:0003684|GO:0006289|GO:0043161
Tpr7g5069 509 MobiDBLite consensus disorder prediction 371 389 - -
Tpr7g5069 509 Pfam XPC-binding domain 1 48 IPR015360 GO:0003684|GO:0006289|GO:0043161
Tpr7g5069 509 MobiDBLite consensus disorder prediction 357 389 - -
Tpr7g5069 509 Gene3D - 97 183 - -
Tpr7g5069 509 PANTHER MAGNESIUM TRANSPORTER MRS2-10 62 509 - -
Tpr7g5069 509 Gene3D Magnesium transport protein CorA, transmembrane region 185 440 - -
Tpr7g5069 509 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 62 509 IPR039204 -
Tpr7g5069 509 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 446 499 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5069 Tpr-Chr7 58227117 58236239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5069 60 509 MRS2 Gene Family AT1G16010 83.333 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5069 K16075 - gmx:100779803 743.806