Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5055 ATGGATTATTCATCATCATGGATTAACACTTCCTTGGATCTCAACATTAATTCCCACAGGGTTCATCAACAACTTCCTAAAAATGTGGTGGAAAACAATTTTTTCTCATTGGAGATGAAGAAATCTTCTCCAAAAGAAGAGTCAAGTGGTGCTTTGGTAGAAGAGTTGAAACGAGTGAGTGCAGAAAACAAGAAGTTGACAGGAATGTTGACAGAGATGTGTGAGAATTACAACACATTGAGAAACAATTTGATGGAATATATGAGAAAGAATCCTGATAAAGAGTCAAGTCCATCAAAGAAAAGAAAATCTGATGAAATAAGTAGCAGTAATAATAATCTAATGGGAGGAGGAGAAGGAGGAGGAGTTAATGGAAACAACTCTGAGAGCAGTTCAAGTGATGAAGATCAATCATGCAAGAAACCAATGGAATTAGAAACTTGCATTAAGGCAAAAGTTTCAAGAGTTTATTACAAACAAGAATCATCTGATTCAAGCCTTATTGTGAAAGATGGATATCAATGGAGAAAATATGGACAAAAGGTGACAAGGGATAATCCTTCTCCAAGAGCATATTTCAAATGTTCATTTGCTCCAAGCTGCACAGTGAAGAAGAAAGTGCAAAGAAGTGTGGAAGATCCATCAGTAGTTGTTGCAACATATGAAGGAGAACACAATCATCCTCATCCTTCTCAAATGGAGTCAACATCATCCGGCACAAATAACCGTTGTAGGAATCCAATAAGTTCAGCAGTGCCTTCTTCTGCACCAAGTACAGTTACCATTGATTGGACAAAATCTAAGTGCAGCAATGAGTCTTCTTCTAAGAAAATGATGATAAATAATCCCAAAATGGAAGTACCTCAGATTTTGGTGGAACAAATGGCTACTTCATTGACCAAGGATCTTAACTTCAGAGCAGCACTAGCTGCTGCTATATCAGGAAAAATGTTGCATCAGAGTTAA 966 0.3706 MDYSSSWINTSLDLNINSHRVHQQLPKNVVENNFFSLEMKKSSPKEESSGALVEELKRVSAENKKLTGMLTEMCENYNTLRNNLMEYMRKNPDKESSPSKKRKSDEISSSNNNLMGGGEGGGVNGNNSESSSSDEDQSCKKPMELETCIKAKVSRVYYKQESSDSSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCTVKKKVQRSVEDPSVVVATYEGEHNHPHPSQMESTSSGTNNRCRNPISSAVPSSAPSTVTIDWTKSKCSNESSSKKMMINNPKMEVPQILVEQMATSLTKDLNFRAALAAAISGKMLHQS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5055 321 Gene3D WRKY domain 150 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr7g5055 321 MobiDBLite consensus disorder prediction 90 139 - -
Tpr7g5055 321 MobiDBLite consensus disorder prediction 90 107 - -
Tpr7g5055 321 SMART WRKY_cls 169 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g5055 321 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 4 320 IPR044810 GO:0003700
Tpr7g5055 321 Coils Coil 70 90 - -
Tpr7g5055 321 SUPERFAMILY WRKY DNA-binding domain 167 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr7g5055 321 Pfam WRKY DNA -binding domain 170 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g5055 321 ProSiteProfiles WRKY domain profile. 164 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g5055 321 MobiDBLite consensus disorder prediction 108 133 - -
Tpr7g5055 321 MobiDBLite consensus disorder prediction 223 242 - -
Tpr7g5055 321 PANTHER TRANSCRIPTION FACTOR 4 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5055 Tpr-Chr7 58120163 58121999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5055 1 320 WRKY Transcription Factor Family AT1G80840 53.153 5.19e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr7g5055 WRKY 3.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5055 - - gmx:100798375 389.037