Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5054 ATGGATCGCAACAACAACAGTAGCAACAAGAAAAGGAACATTCTGTTCAACAAATACGAGATAGGTAAAATCCTAGGACAAGGCAATTTCGCCAAAGTGTATCATGGTAGAAACATGAACACAAACGAAAGCGTAGCTATAAAAGTAATTAAAAAAGAAAAGCTGAAAAAAGAGAGGCTGATGAAACAAATCAAACGTGAAGTTTCCGTGATGCGTCTCGTTCGTCATCCACATATAGTTGAATTGAAAGAAGTCATGGCAAACAAAGCAAAAGTATTCATGGTTGTTGAATATGTCAAAGGAGGTGAACTCTTTGCTAAAGTAGCAAAAGGTAAAATGGAAGAACATGTTGCTAGAAAATATTTTCAACAATTAATCAGTGCTGTTGATTTCTGTCATAGCCGTGGTGTTACTCACCGTGATCTCAAACCTGAGAATCTTCTTTTGGATGAAAATGAAGATCTTAAGGTTAGTGATTTTGGTTTATCTGCTTTGCCGGATCAACGAAGATCCGACGGTATGCTTCTCACACCGTGTGGGACTCCTGCCTACGTTGCACCTGAGGTTTTGAAGAAAATAGGCTATGATGGTTCTAAAGCTGATATTTGGTCTTGTGGTGTTATTCTATTTGCTTTGCTTTGTGGTTATTTACCCTTTCAAGGTGAAAATGTCATGAGAATTTATAGCAAATCTTTTAAAGCTGATTATGCTTTACCTGAATGGATCTCACCAGGTGCTAAGAAATTGATATCTAATTTGCTTTGTGTTGATCCTGAAAAGAGATTTTCTATACCTGATATCATGAAAGATCCATGGTTTCAAGTCGGGTTTATGAGACCTATTGCTTTTTCAATGAAAGAATCTGCTGTGGATGATAACATTGATTTCAGCGGAGATGAAGGTAACAATGGCAGTGATGGAAATAATGCTGCTGCTGATGTTGTCGTCGATGGGATTGTTGGAACTAAGGGTAATCATTCCCGTCGTCCATCTTACAATGCATTCGAGATAATTTCATCGCTGTCGCATGGATTTGATTTGAGGAACTTGTTTGAAACAAGGAAGAGATCGCCATCCATGTTTATATCTAAAAATTCTGCATCTACGGTTGTAGGGAAGATGGAGAATGTAGCAAAAGATCTGAATTTGAAAGTTACTGGAAAAAAAGATTTCATGGTGAAAATGCAGGGGACGACTGAGGGGAGGAAGGGGAAATTGGGTATGACGGTGGAGGTGTTTGAGGTGGCACCTGAGGTGGCTGTGGTTGAGTTTTCTAAGTCTGCAGGAGATACACTTGAGTATGTAAAGTTCTGTGAAGAAGAAGTTAGACCTTCTCTCAAAGACATTGTCTGGAGCTGGCAGGGTGATACTCACTGA 1377 0.3914 MDRNNNSSNKKRNILFNKYEIGKILGQGNFAKVYHGRNMNTNESVAIKVIKKEKLKKERLMKQIKREVSVMRLVRHPHIVELKEVMANKAKVFMVVEYVKGGELFAKVAKGKMEEHVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPDQRRSDGMLLTPCGTPAYVAPEVLKKIGYDGSKADIWSCGVILFALLCGYLPFQGENVMRIYSKSFKADYALPEWISPGAKKLISNLLCVDPEKRFSIPDIMKDPWFQVGFMRPIAFSMKESAVDDNIDFSGDEGNNGSDGNNAAADVVVDGIVGTKGNHSRRPSYNAFEIISSLSHGFDLRNLFETRKRSPSMFISKNSASTVVGKMENVAKDLNLKVTGKKDFMVKMQGTTEGRKGKLGMTVEVFEVAPEVAVVEFSKSAGDTLEYVKFCEEEVRPSLKDIVWSWQGDTH* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5054 458 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g5054 458 PANTHER CBL-INTERACTING PROTEIN KINASE 16 10 457 - -
Tpr7g5054 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Tpr7g5054 458 CDD CIPK_C 333 447 - -
Tpr7g5054 458 ProSitePatterns Protein kinases ATP-binding region signature. 25 52 IPR017441 GO:0005524
Tpr7g5054 458 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g5054 458 Gene3D Transferase(Phosphotransferase) domain 1 9 316 - -
Tpr7g5054 458 Pfam NAF domain 331 386 IPR004041 GO:0007165
Tpr7g5054 458 SUPERFAMILY Protein kinase-like (PK-like) 15 274 IPR011009 -
Tpr7g5054 458 ProSiteProfiles NAF domain profile. 327 352 IPR018451 GO:0007165
Tpr7g5054 458 SMART serkin_6 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g5054 458 PANTHER - 10 457 - -
Tpr7g5054 458 Coils Coil 47 67 - -
Tpr7g5054 458 Gene3D Kinase associated domain 1, KA1 328 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5054 Tpr-Chr7 58104737 58106930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5054 9 458 CBL-interacting serine-threonine protein kinases AT5G25110 58.889 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr7g5054 Pkinase 1.4e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5054 - - gmx:100804244 719.539