Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5053 ATGGCTGTCTCAGGTTCTTCTGGTTCTGGGCAGCCACAATTCATTTCAAGCACTGGAAACCAAAACTTTTCCAATGCACCGCTCATTGACAGTGACACCACAAATCCTGATCAAATTGTTGTCCCTGATAGGACAAGCTGGAAAAACTTATTTGCATATATGGGGCCTGGATTTCTTGTTTCCATTGCATATATAGACCCAGGAAACTTTGAGACGGATCTACAATCTGGGGCACAATTTAGATATGAGTTACTTTGGATCATATTGGTGGCATCTTGTGCTGCTCTTGTAATTCAATCGATGGCAGCCAATCTTGGGGTGGTCACCGGAAAGCATTTAGCAGAGCATTGTAGAGCTGAATATTCGCGGGTGTCCAACTTTATTCTTTGGATTATTGCTGAAATTGCCATAGTGGCCTGTGACATCCCAGAAGTGATCGGGACAGCTTTTGCGTTAAATATGCTCTTCAACATACCTGTTTGGATTGGTGTGTTACTGACCGGACTCAGTACATTGATGCTCTTAGCATTACAACAATATGGGGTTAGGAAACTTGAATTCTTGATTGCATTTCTTGTGTTTACAATTGCTGCGTGTTTTTGGGCTGAGCTTGGATATGCAAAGCCCGATGCTAAAGAAGTTGTGAAGGGTCTTTTTGTGCCACAACTAAAAGGGAGTGGTGCTACTGGCCTTGCAATTTCACTCCTCGGTGCTATGGTCATGCCGCACAATCTCTTCCTGCACTCGGCACTGGTACTCTCTAGGAAAATACCACGATCAGTTCGCGGAATCAAAGAGGCTTGCAGATTTTACATGATAGAAAGTGCCTTTGCTCTTATGGTGGCTTTCCTCATTAATGTTTCTGTCATTTCTGTAAGTGGTGCTGTTTGCAATTCTTCGAATTTGAATGAAGAAGATCGGATGAGCTGTCAGGATTTAGATCTCAACAAAGCTTCCTTCCTACTTAGAAATGTCTTGGGGAAATGGAGTTCAAAACTGTTTGGAGTTGCTTTGCTTGCATCAGGTCAAAGTTCTACGATAACAGGAACCTATGCAGGGCAGTATGTGATGCAGGGATTTCTTGATTTACGACTGACGCCATGGATTCGGAATATGTTAACTCGTTGCTTAGCCATAGTTCCTAGTTTGATTGTTGCGGTCATTGGTGGCTCTACTGGGGCTGGGAAGCTCATAATAATTGCATCTATGATCTTATCATTTGAGCTTCCCTTTGCTTTGGTACCACTCCTCAAGTTCACTAGTAGCAAAACCAAGATGGGGGCACATGTTAACTCTACCATGATATCCGCCGTTACTTGGATAATCGGCTCACTTATTATGGTTATTAATATATACTACTTAATGAATGGTTTCATCAAGCTTCTTCTTCATAGTGATATAGAAATTGTAGCTAAGGTGTTTCTTGGGATATTAGGATTTTCAGGCATGGCAGTATATTTGGCTGGTATAGCTTATCTTGTACTTCGCAAAAATAAAGAGGGTACACACCTTTTGGCTCTAACAGCACCTGAAAATCAGCAAATGGCAAATGAACAAGTAAATGGGTCAATCTATTGTCTTCCAAGAGAAGACATAGTAAACATGCAATTGCCTCAGAGAAGTAGTCCTGCAGATCTTGACTGA 1644 0.4185 MAVSGSSGSGQPQFISSTGNQNFSNAPLIDSDTTNPDQIVVPDRTSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQFRYELLWIILVASCAALVIQSMAANLGVVTGKHLAEHCRAEYSRVSNFILWIIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLMLLALQQYGVRKLEFLIAFLVFTIAACFWAELGYAKPDAKEVVKGLFVPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMIESAFALMVAFLINVSVISVSGAVCNSSNLNEEDRMSCQDLDLNKASFLLRNVLGKWSSKLFGVALLASGQSSTITGTYAGQYVMQGFLDLRLTPWIRNMLTRCLAIVPSLIVAVIGGSTGAGKLIIIASMILSFELPFALVPLLKFTSSKTKMGAHVNSTMISAVTWIIGSLIMVINIYYLMNGFIKLLLHSDIEIVAKVFLGILGFSGMAVYLAGIAYLVLRKNKEGTHLLALTAPENQQMANEQVNGSIYCLPREDIVNMQLPQRSSPADLD* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5053 547 PANTHER METAL TRANSPORTER NRAMP1 11 547 - -
Tpr7g5053 547 PRINTS Natural resistance-associated macrophage protein signature 129 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr7g5053 547 PRINTS Natural resistance-associated macrophage protein signature 157 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr7g5053 547 PRINTS Natural resistance-associated macrophage protein signature 182 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr7g5053 547 PRINTS Natural resistance-associated macrophage protein signature 232 255 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr7g5053 547 PRINTS Natural resistance-associated macrophage protein signature 342 361 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr7g5053 547 PRINTS Natural resistance-associated macrophage protein signature 370 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr7g5053 547 PRINTS Natural resistance-associated macrophage protein signature 402 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr7g5053 547 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 49 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr7g5053 547 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 11 547 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr7g5053 547 Hamap Divalent metal cation transporter MntH [mntH]. 42 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tpr7g5053 547 Pfam Natural resistance-associated macrophage protein 70 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5053 Tpr-Chr7 58085771 58090765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5053 16 540 Inorganic Solute Cotransporters AT1G15960 79.507 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5053 K21398 - gmx:100797298 952.199