Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5052 ATGCCTGCCGCTGACGAATCTTCATCAATTTCCGGCCAAACCATATGTGTCACCGGTGCCGGAGGCTTCATCGCTTCATGGATGGTTAAACTTCTCTTAGAAAAAGGCTACACTGTCAGAGGAACTTTGAGAAACCCAGATGATCCCAAAAATGGGCACTTGAAAGATTTGGAAGGAGCAAAGGAAAGGTTAACTCTTGTCAAAGTTGATCTCCTTGATCTTAACTCCGTTAAACAAGCCGTTAATGGATGTCATGGTGTTTTTCACACTGCTTCTCCCGTTACAGATAACCCCGAAGAAATGGTGGAGCCTGCAGTGAATGGAGCAAAAAATGTGATCATAGCGGCTGCCGAAGCAAATGTGCGGCGCGTGGTTTTCACTTCATCAATTGGAGCTGTCTATATGGACCCCAACAGGAGTGTTGATGTTGAAGTTGACGAGTCTTGTTGGAGTGATTTGGAGTTTTGCAAGAACACCAAGAATTGGTATTGCTATGGAAAAGCAGTGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAGAAAGGGGTGGATTTGGTTGTAGTGAATCCAGTTTTGGTTCTAGGACCATTGCTACAACCAACAATCAATGCAAGCACAATTCACATACTAAAGTACCTAACTGGATCAGCTAAGACCTATGCAAATGCAACACAAGCTTATGTTCATGTTAGGGATGTGGCATTAGCTCACATACTTGTTTTTGAGAAACCATCTGCTTCTGGTAGATACTTATGTGCTGAAAGTTCATTGCACCGTGGGGAGCTTGTTGAAATTCTTGCTAAGTACTTCCCAGAGTACCCTATTCCTACCAAGTGTTCAGATGAAAAGAATCCTAGAGTGAAACCACATATCTTCTCAAATAAAAAACTGAAAGATTTGGGATTGGAATTCACTCCAGTGAGTCAATGTTTATATGAAACTGTTAAGAGCTTGCAAGAGCAAGGTCATCTTTCTGTTCCAAAGAAAGAAGATTAA 996 0.4227 MPAADESSSISGQTICVTGAGGFIASWMVKLLLEKGYTVRGTLRNPDDPKNGHLKDLEGAKERLTLVKVDLLDLNSVKQAVNGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEANVRRVVFTSSIGAVYMDPNRSVDVEVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVFEKPSASGRYLCAESSLHRGELVEILAKYFPEYPIPTKCSDEKNPRVKPHIFSNKKLKDLGLEFTPVSQCLYETVKSLQEQGHLSVPKKED* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5052 331 CDD FR_SDR_e 16 302 - -
Tpr7g5052 331 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 319 IPR036291 -
Tpr7g5052 331 Pfam NAD dependent epimerase/dehydratase family 15 246 IPR001509 -
Tpr7g5052 331 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 326 - -
Tpr7g5052 331 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 326 - -
Tpr7g5052 331 Gene3D - 4 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5052 Tpr-Chr7 58077947 58082488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5052 10 278 Monolignol Biosynthesis Gene Families AT1G80820 74.349 2.08e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5052 K09753 - gmx:100789070 585.874