Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g5051 ATGGAGCATATTAATAATGAGGAAATTCCATCAGCACCAGCAACACCAGGCACTCCTGGTGCACCTCTGTTTGGTGGGTTTAAGTCAGAGAGAAGTGGGAATGGTAGTAATAAGTACAAGAAGTCCCTCCTTAAGAATTGTAAATGTTTCGGTGTCCAAGAATGGACCTTAGAAGATGGAGCTCTACCCACCGTCACTTGTTCATTAATGCCACCTCCTCCTCCTGTTCCTCTCGCAAAAAAGATAGGAGCTGAGTTTATAGGGACATTTATTCTGATGTTTGCTGGGACAGCCACTGCTATTGTAAACCAAAAGACAAACGGGGCGGAAACTCTGATCGGATGTGCTACCTCGACTGGTCTTGCCGTTATGATCATCATCCTCTCCACCGGCCACATCTCCGGTGCTCATCTCAACCCTGCAGTCACCATTTCCTTTGCTGCATTAAAGCACTTCCCGTGGAAGCATGTGCCTATGTATATTGGTGCACAAGTTTTGGCATCAATATGCGCTGCATATGCTCTCAAAGGGGTTTTTCACCCTTTCATGAATGGCGGAGTCACTGTTCCTTCCGGAGGATATGGCCAAGCTTTTGCTTTAGAGTTCATTATCAGCTTTAATCTCATGTTCGTTGTCACTGCAGTGGCCACTGATACAAGAGCTGTAGGAGAACTAGCAGGAATTGCGGTTGGAGCAACTGTGATGCTCAATATACTCATAGCAGGGCCAATAACAGGAGCATCAATGAATCCAGTAAGAACTCTAGGTCCAGCTATTGCTGCAAACAACTACAAAGCCATATGGGTCTATCTATTAGCTCCAATACTTGGAGCTCTAGGCGGGGCAGGTACTTATACAGCAGTAAAGCTGCCAGAAGAAGATGATAACGCAAAGACTAATGCTTCTTCAAACCACCCCAGCTTCAGAAAATGA 933 0.4566 MEHINNEEIPSAPATPGTPGAPLFGGFKSERSGNGSNKYKKSLLKNCKCFGVQEWTLEDGALPTVTCSLMPPPPPVPLAKKIGAEFIGTFILMFAGTATAIVNQKTNGAETLIGCATSTGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKHVPMYIGAQVLASICAAYALKGVFHPFMNGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPITGASMNPVRTLGPAIAANNYKAIWVYLLAPILGALGGAGTYTAVKLPEEDDNAKTNASSNHPSFRK* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g5051 310 PANTHER AQUAPORIN NIP2-1 7 300 IPR034294 -
Tpr7g5051 310 CDD MIP 80 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5051 310 PANTHER BNAA02G36290D PROTEIN 7 300 - -
Tpr7g5051 310 SUPERFAMILY Aquaporin-like 77 297 IPR023271 -
Tpr7g5051 310 PRINTS Major intrinsic protein family signature 80 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5051 310 PRINTS Major intrinsic protein family signature 119 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5051 310 PRINTS Major intrinsic protein family signature 156 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5051 310 PRINTS Major intrinsic protein family signature 200 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5051 310 PRINTS Major intrinsic protein family signature 231 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5051 310 PRINTS Major intrinsic protein family signature 268 288 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5051 310 Pfam Major intrinsic protein 78 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g5051 310 Gene3D Glycerol uptake facilitator protein. 75 302 IPR023271 -
Tpr7g5051 310 ProSitePatterns MIP family signature. 137 145 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g5051 Tpr-Chr7 58066191 58068003 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g5051 4 310 Major Intrinsic Protein MIP AT1G80760 76.603 1.97e-166 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g5051 K09874 - gmx:100815637 482.256